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Protein Alignment SoxN and sox18

DIOPT Version :9

Sequence 1:	NP_001260269.1	Gene:	SoxN / 44275	FlyBaseID:	FBgn0029123	Length:	761	Species:	Drosophila melanogaster
Sequence 2:	NP_001123409.1	Gene:	sox18 / 100170185	XenbaseID:	XB-GENE-483233	Length:	362	Species:	Xenopus tropicalis

Alignment Length:	253	Identity:	81/253 - (32%)
Similarity:	118/253 - (46%)	Gaps:	49/253 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   178 RVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKE 242
            |::|||||||||::.:|:::|..||.:||:.:||.||..||:||.:|||||::||:|||..|:::
Frog    67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLSSAEKRPFVEEAERLRVQHLQD 131

  Fly   243 HPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQS--------- 298
            ||:|||||||| |...|.|..                  :|....|.:|..||..:
Frog   132 HPNYKYRPRRK-KQAKKLKRV------------------DPSPLLRNEGYRGQAMANLSHFRDLH 177

  Fly   299 -LNGSGGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSY-MGQHYAA 361
             |.|||.    ..:......:.:..|:.:.:.| .:.|......|||.....||... .||....
Frog   178 PLGGSGD----LESYGLPTPEMSPLDVVEPSEP-AFFPPHMREEADPGPFRTYQHGVDFGQEKTL 237

  Fly   362 QR----YDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSP--SPYGGSSLQQQPGSP 413
            :.    |.....:..|:....|.|....:|:|      |||  :|.|  .|...|.:|
Frog   238 REISLPYSSSPSHMGGFLRTPTASAFYYNPHG------GSPACTPLG--QLSPPPEAP 287

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.