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Protein Alignment SoxN and sox15
DIOPT Version :10
| Sequence 1: | NP_001260269.1 |
Gene: | SoxN / 44275 |
FlyBaseID: | FBgn0029123 |
Length: | 761 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001120046.1 |
Gene: | sox15 / 100145022 |
XenbaseID: | XB-GENE-6455809 |
Length: | 199 |
Species: | Xenopus tropicalis |
| Alignment Length: | 55 |
Identity: | 18/55 - (32%) |
| Similarity: | 29/55 - (52%) |
Gaps: | 11/55 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 118 ALMELESPLPLDGDTMASIEMPE---QDEEDPVEGSKALVSGWGKTL-NRFHSAL 168
||:| ||.|:.|...::|:.| :..|.|.:..:|| .:.| :||.||:
Frog 3 ALVE---PLGLERDVSRAVELLERLQRSGELPPQKLQAL----QRVLQSRFCSAI 50
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SoxN | NP_001260269.1 |
HMG-box_SoxB |
177..252 |
CDD:438790 |
|
| sox15 | NP_001120046.1 |
HMG-box_SOX |
22..95 |
CDD:438820 |
10/33 (30%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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