Protein Alignment SoxN and tfam

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_002937148.2
• Gene: tfam / 100135718
• XenbaseID: XB-GENE-978256
• Length: 281
• Species: Xenopus tropicalis
• Alignment Length: 173
• Identity: 35/173 - (20%)
• Similarity: 69/173 - (39%)
• Gaps: 41/173 - (23%)

  Fly   147 GAGSALSSLTGGSSNNNNNSATA---------------NKNQQHADRVKRPMNAFMVWSRGQRRK 196
            |.|..|.||.|.:|:......:.               :|....::..|||:.|::.:|..||.|
 Frog     8 GVGGLLRSLAGINSSQAARCTSVSSGILGLQCSPFRWFSKGATSSEYPKRPLTAYLRYSIEQRPK 72

  Fly   197 MASDNPKMHNSEISKRLGAQWKDLSESEK-----------RPFIDEAK----RLRAVHMKEHPDY 246
            :....|:....:::|.:..:||.|..:||           :.:.:|.|    :|..:.::.|.:.
 Frog    73 LHKQYPEAKMMDLTKIIALEWKGLPSAEKERYEVVANAEQKKYREEVKQYREKLSPMQLELHREQ 137

  Fly   247 KYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPTRV 289
            :.:...|.|::.|.:|...:           |.|..|.:|..:
 Frog   138 RRQRLAKRKSVRKKRELTVL-----------GRPKRPRSPFNI 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	19/85 (22%)
tfam	XP_002937148.2	HMGB-UBF_HMG-box	55..120	CDD:238686	16/64 (25%)
		HMGB-UBF_HMG-box	160..221	CDD:238686	3/10 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010