Protein Alignment SoxN and sox5

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_031753364.1
• Gene: sox5 / 100038209
• XenbaseID: XB-GENE-487032
• Length: 763
• Species: Xenopus tropicalis
• Alignment Length: 377
• Identity: 89/377 - (23%)
• Similarity: 155/377 - (41%)
• Gaps: 69/377 - (18%)

  Fly    16 TMPPHHTSAALHGHAASPYSALAPLMNLGQSHLTHSQLSHHNHHHHHMSAH----------IAAS 70
            |.|.:.::......:.||.|..:|.:....|.|.|..:.       ..||.          :::.
 Frog   391 TQPLNLSAKPKGSDSKSPSSPTSPHIPRLSSALAHKPIC-------STSASTPLRVNSIDILSSI 448

  Fly    71 QSPNPLSSLQSSMANTLNGSQVGQQQQQQQQQQSSPLHSSSELS-----PTQSSIGSHHMTSPVS 130
            .||..|:...:.........|:.:|.:::||.....:.:|..|:     ..:||:.|  :|..::
 Frog   449 TSPGYLNDHDAVTKAIQEARQMKEQLRREQQALDGKVVNSLGLNNCRTDKDKSSLES--LTQQLT 511

  Fly   131 HQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQRR 195
            .:.:..:..|.......:|.:..|.....|.....|.....|:.|   :||||||||||::.:||
 Frog   512 GKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYRESRGRGSNEPH---IKRPMNAFMVWAKDERR 573

  Fly   196 KMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKT 260
            |:....|.||||.|||.||::||.::..||:|:.:|..||...|::::|||||:||.|...|...
 Frog   574 KILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDG 638

  Fly   261 KE---------------------------KYPM---GGLMPGQTVGGGAPGEPVTPTRVQGQPGQ 295
            |:                           :.|:   |.:.||.....|.|...:        |.:
 Frog   639 KKLRIGEYKAIMRSRRQEMRQYFNVGQQAQIPISTAGVVYPGAIAMAGMPSPHL--------PSE 695

  Fly   296 NQSLNGS---GGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADP 344
            :.|::.|   |.....:...........::::::.:. ||.|.:.|....||
 Frog   696 HSSVSSSPEPGMPVIQSTYGIKEEEPHIKEEIHREDI-NGEMYDEYDEDDDP 746

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	36/70 (51%)
sox5	XP_031753364.1	SOX-TCF_HMG-box	556..627	CDD:238684	37/73 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910