DRSC/TRiP Functional Genomics Resources

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Protein Alignment disp and PTCH1

DIOPT Version :9

Sequence 1:NP_524734.2 Gene:disp / 44274 FlyBaseID:FBgn0029088 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_000255.2 Gene:PTCH1 / 5727 HGNCID:9585 Length:1447 Species:Homo sapiens


Alignment Length:914 Identity:164/914 - (17%)
Similarity:301/914 - (32%) Gaps:313/914 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   451 VSLGGTFVMASVWLYTGSAFITLMSCVAICFSLGLAYFFYAIVLEFEFFPYMNLLAVVVIIGIGA 515
            |.|.|..::|          :::.:.:.:|..:|::  |.|...  :..|::.|       |:|.
Human   469 VGLAGVLLVA----------LSVAAGLGLCSLIGIS--FNAATT--QVLPFLAL-------GVGV 512

  Fly   516 DDVFLFLKIWHCVLTERFSNRCTLTTQSQSALPTLENSDHTESLENIMALTMRHAAASMFVTSLT 580
            |||||        |...||.     |.....:|          .|:.....::...||:.:||::
Human   513 DDVFL--------LAHAFSE-----TGQNKRIP----------FEDRTGECLKRTGASVALTSIS 554

  Fly   581 TAGAFYASYSSSITAIKCFGIFAGTVVVTNYLLMITWLPASVSIMERLFATRMSCHHPMSIKLIH 645
            ...||:.:....|.|::.|.:.|..|||.|:.:::...||.                 :|:.|..
Human   555 NVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAI-----------------LSMDLYR 602

  Fly   646 ACKKSINRFCQMFEECITKSIMNYAYLWLLIFGALGASSAVIVFWYPGLQLPEKSHFQLFVSKH- 709
            ...:.::.||.....|:::.|                                :...|.:...| 
Human   603 REDRRLDIFCCFTSPCVSRVI--------------------------------QVEPQAYTDTHD 635

  Fly   710 --------PFEVYS-SLKQQFWFEKPLQAYENFKMHMHFVW---------GVQAV----DDGDYT 752
                    |:..:| :.:.|...:..:|....:..|.|..:         .||.|    |.....
Human   636 NTRYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQ 700

  Fly   753 NPNSYGHLH------YDNNFNVSSRPAQLWILDFCQSVRQQPFYKET----------LGMLLPNC 801
            :|.|.....      .|::.:....|...|.|.........||..:.          ||:|    
Human   701 SPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLL---- 761

  Fly   802 FIENLIDYMKRRCIDDMDSTRKDRSPCCDAQFPFEPHIFEYCLPQSISNMYDTT----------- 855
               .:..|...|..|.:|.|  |..|....::.|....|:|.   |..|||..|           
Human   762 ---GVSLYGTTRVRDGLDLT--DIVPRETREYDFIAAQFKYF---SFYNMYIVTQKADYPNIQHL 818

  Fly   856 ----------------------------FFRPGVAGPKFA-----EAPRLETEDYLGMSGNESAE 887
                                        :||..:.|.:.|     |..::...:|...|.:....
Human   819 LYDLHRSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLA 883

  Fly   888 Y------------------------STNGSFTPLLVKALVIEFESN--VAYSTIYANIRQ----- 921
            |                        ..:|...|......:..:.||  |||:...||||.     
Human   884 YKLLVQTGSRDKPIDISQLTKQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEW 948

  Fly   922 FYESVEHWFQMQLKTAPPE----------LQGGWFTSD--------------------------- 949
            .::..::..:.:|:....|          |.|...|||                           
Human   949 VHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGY 1013

  Fly   950 -LKFYNVQDTLSHDTFVAICLAMAASLAVLLCFTVN-----ILISIYAVLTVSLSIFNTVAVLIL 1008
             ..|:.....|.|...:.|.:.:|.:..|...|.:|     |::.:.|::||.|     ..::.|
Human  1014 PFLFWEQYIGLRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVEL-----FGMMGL 1073

  Fly  1009 LGWQLNILESIAVSTAIGLAVDFSLHYGIHYRMSPVKERLAATQFVLSRIIGPTVMAATTTGLAG 1073
            :|.:|:.:..:.:..::|:.|:|::|..:.: ::.:.::.......|..:..|.:..|.:| |.|
Human  1074 IGIKLSAVPVVILIASVGIGVEFTVHVALAF-LTAIGDKNRRAVLALEHMFAPVLDGAVST-LLG 1136

  Fly  1074 GIMMASNILPYIQIGVFLVVVMIVSWFYATFFLMSLLRVAGPQHGFLELKWPLWSKRSSGSSKFY 1138
            .:|:|.:...:           ||.:|:|   ::::|.:.|..:|.:.|...|     |....:.
Human  1137 VLMLAGSEFDF-----------IVRYFFA---VLAILTILGVLNGLVLLPVLL-----SFFGPYP 1182

  Fly  1139 ERKPSQVIASEQLLTPTSS---AIVELANSETHELESLNSNSLIKTISGIESAHALSSLPRDFEH 1200
            |..|:..:  .:|.||:..   ::|..|....|            |.||.:|:        |.|:
Human  1183 EVSPANGL--NRLPTPSPEPPPSVVRFAMPPGH------------THSGSDSS--------DSEY 1225

  Fly  1201 SFQT 1204
            |.||
Human  1226 SSQT 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dispNP_524734.2 Patched <444..1111 CDD:280598 141/816 (17%)
MMPL 457..627 CDD:304422 36/169 (21%)
TM_PBP1_branched-chain-AA_like 964..>1109 CDD:294309 29/149 (19%)
PTCH1NP_000255.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
2A060602 43..1206 CDD:273338 152/869 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1189..1234 15/63 (24%)
PHA03377 <1253..1369 CDD:177614
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1270..1360
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154924
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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