DRSC/TRiP Functional Genomics Resources

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Protein Alignment disp and ptchd4

DIOPT Version :9

Sequence 1:NP_524734.2 Gene:disp / 44274 FlyBaseID:FBgn0029088 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001025356.1 Gene:ptchd4 / 564097 ZFINID:ZDB-GENE-041001-178 Length:897 Species:Danio rerio


Alignment Length:1012 Identity:185/1012 - (18%)
Similarity:348/1012 - (34%) Gaps:300/1012 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 PTDGWADMHRRQPIEGFFCDSSPRKEYSH----------FVVQRIGPNATDSLFDLNGLLAMCQL 281
            ||...|.:.|......|..|.|..|.||.          .::.|.|.|             :.:|
Zfish    59 PTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLARSGGN-------------ILEL 110

  Fly   282 QDQITEV--------PSYRAFCEPEMLTTECCRPWSLPNYAAMLANKSSCFDLTTEDVTSLHTLL 338
            .:|:.:|        .:|:.|            .::..:...:......|.   .:|:.::    
Zfish   111 AEQVLQVHKKVLDMRVNYKGF------------NYTFAHLCVLRHRDKRCL---LDDIITI---- 156

  Fly   339 LGCYEYFHDLKM----DNHCNEIPHCRAPEECK--RLNIVFNVLNFLTDFSFIKSNDSNVYLKYA 397
                  |.|:::    ::..:::|........|  |::.:.:.|..:.    :.:|:.:..:|:|
Zfish   157 ------FEDIRLAVLSNSTFSKVPVSYPNTTLKDGRVSFIGHQLGGVA----LPANNRDQQVKFA 211

  Fly   398 MIFIPVAQSNRLLPLFHE-----WED--VELINELVEVVAMDLGLEN----ELFNEL-------- 443
            ...........|.|:..:     ||.  .:|:::|. ..:.:|.:::    .|:.:.        
Zfish   212 RAIQITYYLRNLGPVVQDIIAEKWETEFCKLVHQLA-TDSQELHIQSLTSFSLWRDFHKTGVLAK 275

  Fly   444 --LLTDVWLVSLGGTFVMASVWLYTGSAFITLMSCVAICF----SLGLAYF----FYAIVLEFEF 498
              :|..:.||.|..|...:......|..|:.|:..:.||.    :.|:.:.    |.:.:|...|
Zfish   276 SEVLVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGIPF 340

  Fly   499 FPYMNLLAVVVIIGIGADDVFLFLKIWH-----CVLTERFSNR------CTLTTQSQSALPTLEN 552
            |          .:|.|...||..|..|.     ....||.::.      |...|.|...:.....
Zfish   341 F----------AMGHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMG 395

  Fly   553 SDHTESLENIMALTMRHAAASMFVTSLTTAGAFYASYSSSITAIKCFGIFAGTVVVTNYLLMITW 617
            :....::|::...     ..||.|..|......::.|.|.:       :|||.:....|..:...
Zfish   396 ASPFTNIESVKVF-----CQSMCVAVLVNYFYVFSFYGSCL-------VFAGQLEQNRYHSVFCC 448

  Fly   618 LPASVSIMER---LFATRMSCHHPMSIKLIHACKKSINRFCQMF-EECITKSIMN-YAYLWLLIF 677
            ...||..::|   .|.|.||..|.:|..  |......|.|.|.| .|..|:.|.| |...:::|.
Zfish   449 KIPSVEYLDRQPTWFKTMMSDGHDLSTH--HDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVIL 511

  Fly   678 GALGASSAVIVFWYPG-LQLPEKSH-FQLFVSKHPFEVYSSLKQQFWFEKPLQAYENFKMHMHFV 740
            ..:.||     |.:.| ||:.:.|: ..|..|..| .|..:|.||.:|       .|:..    |
Zfish   512 YLIYAS-----FSFMGCLQISDGSNIINLLASNSP-SVSFALTQQKYF-------SNYSP----V 559

  Fly   741 WGVQAVDDGDYTNPNSYGHLH-YDNNFNVSSRPAQLWILDFCQSVRQQPFYKETLGMLLPNCFIE 804
            .|....:..:|.|.....||. ....||..|     |                          |:
Zfish   560 IGFYIYEPIEYWNSTVQEHLKTLGQGFNKIS-----W--------------------------ID 593

  Fly   805 NLIDYMKRRCIDDMDSTRKDRSPCCDAQFPFEPHIFEYCLPQSISNMYDTTFFRPGVAGPKFAEA 869
            |...::  |.::...||:.|                       ..::..|:|.|    .|::...
Zfish   594 NYFHFL--RVVNISASTKSD-----------------------FISILKTSFLR----SPEYQHF 629

  Fly   870 PRLETEDYLGMSGNESAEYSTNGSFTPLLVKALVIEFESNVAYSTIYANIRQFYESVEHWFQMQL 934
                .:|.:         :|.||:             |.::..|.:|...|...::.|...::..
Zfish   630 ----VDDII---------FSKNGA-------------EYDIIASKMYLVARTTEKTREEVVELLE 668

  Fly   935 KTAPPELQGGWFTSDLKF------YNVQDTLSHDTFVAICLAMAASLAVLLCFT----VNILISI 989
            :..|..|     .:.:||      :...|..| .:.::..|....|:..:|..|    :|.|.:.
Zfish   669 RLRPLSL-----INSIKFIVFNPTFVFMDRYS-SSIISPILTSGFSVLTILILTFFLVINPLGNF 727

  Fly   990 YAVLTVSLSIFNTVAVLILLGWQLNILESIAVSTAIGLAVDFSLHYGIHYRMSPVKERLAATQFV 1054
            :.:|||:......:.::.|  |.:: ::||::     |.:.::|::.:.:....:...:.||:..
Zfish   728 WLILTVTSVELGVLGLMTL--WNVD-MDSISI-----LCLIYTLNFAMDHCAPHLYTFVLATEHT 784

  Fly  1055 LSRII-------GPTVMAATTTGLAGGIMMASNILPYIQIGVFLVVVMIVSWFYATFFLMSLLRV 1112
            .::.|       |..::..|:..:.|       |:|         ::.:.|....|.|..||| .
Zfish   785 RTQCIKISLEEHGAAILQNTSCFVIG-------IMP---------LLFVPSNLTYTLFKCSLL-T 832

  Fly  1113 AG--PQHGFLELKWPLW------SKRSSGSSKFYERK 1141
            ||  ..|.|:.|  |::      ||:.....|..:||
Zfish   833 AGCTVLHCFVIL--PVFLTFFPPSKKRHKKKKRAKRK 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dispNP_524734.2 Patched <444..1111 CDD:280598 136/710 (19%)
MMPL 457..627 CDD:304422 34/188 (18%)
TM_PBP1_branched-chain-AA_like 964..>1109 CDD:294309 26/155 (17%)
ptchd4NP_001025356.1 Patched 97..853 CDD:280598 170/958 (18%)
MMPL 298..449 CDD:304422 32/172 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 856..881 3/12 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589956
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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