DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment disp and ptc

DIOPT Version :9

Sequence 1:NP_524734.2 Gene:disp / 44274 FlyBaseID:FBgn0029088 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_523661.2 Gene:ptc / 35851 FlyBaseID:FBgn0003892 Length:1286 Species:Drosophila melanogaster


Alignment Length:1304 Identity:247/1304 - (18%)
Similarity:449/1304 - (34%) Gaps:407/1304 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 QSSHEHHDVAQKMMQFKKRLKA-TSSPSPNLGFDTWIGDSGVFR-DYEITNDSASSSLEPTRRTE 190
            :|:..|..|.|..:|...||:| .:.....:|.|    :|...: ..:.|:|..:|.|.|.....
  Fly    93 KSAQIHSKVHQLWIQEGGRLEAELAYTQKTIGED----ESATHQLLIQTTHDPNASVLHPQALLA 153

  Fly   191 QIEYGHNTTSVDEEEHQQRVQTKKSTWRLLKQAATLPTDGWADMHRRQ-------------PIEG 242
            .:|.....|:|       :|....:.|.|........|..:..::..:             |::.
  Fly   154 HLEVLVKATAV-------KVHLYDTEWGLRDMCNMPSTPSFEGIYYIEQILRHLIPCSIITPLDC 211

  Fly   243 FFCDSSPRKEYSHFVVQRIGPNATDSLFDLNGLL---------AMCQLQDQITE---------VP 289
            |:..|           |.:||.:...:..||..|         .|..::.:::|         |.
  Fly   212 FWEGS-----------QLLGPESAVVIPGLNQRLLWTTLNPASVMQYMKQKMSEEKISFDFETVE 265

  Fly   290 SY--RAFCEPEMLTTECCRPWSLPNYAAMLANKSSCFDLTTEDVTSLHTLLLGCYEYFHDLKMDN 352
            .|  ||......:...|..|.: ||......||:|   ....||.::  |..|||.|        
  Fly   266 QYMKRAAIGSGYMEKPCLNPLN-PNCPDTAPNKNS---TQPPDVGAI--LSGGCYGY-------- 316

  Fly   353 HCNEIPHCRAPEECKRLNIVFNVLNFLTDFSFIKSNDSNVYLKYAMIFIPVAQSNRLLPLFHEWE 417
               ...|...|||.    ||...          |.|.|. :|:.|.....|.|......::.:|:
  Fly   317 ---AAKHMHWPEEL----IVGGA----------KRNRSG-HLRKAQALQSVVQLMTEKEMYDQWQ 363

  Fly   418 DVELINEL-------VEVV-AMDLGLENELFNELLLT---------DVWLVS------------- 452
            |...::.|       .||: |.......|:  |.||.         |:::.|             
  Fly   364 DNYKVHHLGWTQEKAAEVLNAWQRNFSREV--EQLLRKQSRIATNYDIYVFSSAALDDILAKFSH 426

  Fly   453 ---LGGTFVMASVWLYTGSAFITLM---------SCVAI------CFS----LGLAYFFYAIVLE 495
               |.....:|...||   ||.||:         |.|.:      |||    |||     :.:|.
  Fly   427 PSALSIVIGVAVTVLY---AFCTLLRWRDPVRGQSSVGVAGVLLMCFSTAAGLGL-----SALLG 483

  Fly   496 FEFFPYMNLLAVVVIIGIGADDVFLFLKIWHCVLTERF--SNRCTLTTQSQSALPTLENSDHTES 558
            ..|......:...:.:|:|.|.:|:        ||..:  |||...|                  
  Fly   484 IVFNAASTQVVPFLALGLGVDHIFM--------LTAAYAESNRREQT------------------ 522

  Fly   559 LENIMALTMRHAAASMFVTSLTTAGAFYASYSSSITAIKCFGIFAGTVVVTNYLLMITWLPASVS 623
                 .|.::....|:..::.:|||:|:|:....:.|:|.|.:.|..|:.:|....:...||.:|
  Fly   523 -----KLILKKVGPSILFSACSTAGSFFAAAFIPVPALKVFCLQAAIVMCSNLAAALLVFPAMIS 582

  Fly   624 I-MERLFATR-----------------------------MSCHHPMS-----IKL---------- 643
            : :.|..|.|                             ....||.|     :.|          
  Fly   583 LDLRRRTAGRADIFCCCFPVWKEQPKVAPPVLPLNNNNGRGARHPKSCNNNRVPLPAQNPLLEQR 647

  Fly   644 --IHACKKSINRFCQMFEECITKSIMNYAY---------LWLLIFGALGASSAVIVFWYPGLQL- 696
              |.....|:..|          |:..:|:         .|:.....:|..:|:|...|...:| 
  Fly   648 ADIPGSSHSLASF----------SLATFAFQHYTPFLMRSWVKFLTVMGFLAALISSLYASTRLQ 702

  Fly   697 ---------PEKSHFQLFVSKHP--FEVYSSLK-QQFWFEKPLQA------YENFKMHMHFV--- 740
                     |:.|:...|:....  |..||... .|..||.|.|.      :::|....|.:   
  Fly   703 DGLDIIDLVPKDSNEHKFLDAQTRLFGFYSMYAVTQGNFEYPTQQQLLRDYHDSFVRVPHVIKND 767

  Fly   741 --------------W--GVQAVDDGDYTNPNSYGHLHYDNNFNVSSRPAQLWILDFCQSVR---- 785
                          |  .:|.:.|.:|.:    |.|..:..|..:|..|   ||.:...|:    
  Fly   768 NGGLPDFWLLLFSEWLGNLQKIFDEEYRD----GRLTKECWFPNASSDA---ILAYKLIVQTGHV 825

  Fly   786 QQPFYKETLGMLLPNCFIEN--------LIDYMKRRCIDDMDSTRKDRSPCC--DAQFPFEPHIF 840
            ..|..||   ::|.|..:.:        ..:|:.....:|:.:....:....  ..|:..:|:.:
  Fly   826 DNPVDKE---LVLTNRLVNSDGIINQRAFYNYLSAWATNDVFAYGASQGKLYPEPRQYFHQPNEY 887

  Fly   841 EYCLPQSISNMY-DTTFFRPGVAGPKFAEAPRLETEDYLGMSGNESAEYSTNGSFTPLLVKALVI 904
            :..:|:|:..:| ...|:..|:     .:..:::|  .:|...:.|.:|...|          :.
  Fly   888 DLKIPKSLPLVYAQMPFYLHGL-----TDTSQIKT--LIGHIRDLSVKYEGFG----------LP 935

  Fly   905 EFESNVAYSTIYANIRQFYESVEHWFQMQLKTAPPELQGGWFTSDLKFYNVQDTLSHDTFVAICL 969
            .:.|.:.:.        |:|                          ::..::.:|:   .:..|:
  Fly   936 NYPSGIPFI--------FWE--------------------------QYMTLRSSLA---MILACV 963

  Fly   970 AMAASLAVLLCFTVNILISIYAVLTVSLSIFNTVA----VLILLGWQLNILESIAVSTAIGLAVD 1030
            .:||.:.|.|     :|:|::|.:.|.||:..::|    .:.|||.:|:.:.::.:..::|:.:.
  Fly   964 LLAALVLVSL-----LLLSVWAAVLVILSVLASLAQIFGAMTLLGIKLSAIPAVILILSVGMMLC 1023

  Fly  1031 FSLHYGIHYRMSPVKERLAATQFVLSRIIGPTVMAATTTGLAGGIMMASNILPYIQIGVF---LV 1092
            |::...:.: |:.|..|....|..:...:||.|....|:|:| ..|::::...:: |..|   |:
  Fly  1024 FNVLISLGF-MTSVGNRQRRVQLSMQMSLGPLVHGMLTSGVA-VFMLSTSPFEFV-IRHFCWLLL 1085

  Fly  1093 VVMIVSWFYATFFLMSLLRVAGPQHGFLELKW--------PLWSKRSSGSSKFYERKPSQVIASE 1149
            ||:.|....:......||.:.||:...:.|:.        ||..:.|..|.|.|           
  Fly  1086 VVLCVGACNSLLVFPILLSMVGPEAELVPLEHPDRISTPSPLPVRSSKRSGKSY----------- 1139

  Fly  1150 QLLTPTSSAIVELANSETHELESLNSNSLIKTIS----GIESAHALSSLPRDFEHSFQTMHECKY 1210
             ::..:.|:......|..|..:.||..|| .||:    ..:|:::...:|.|:.:..:......|
  Fly  1140 -VVQGSRSSRGSCQKSHHHHHKDLNDPSL-TTITEEPQSWKSSNSSIQMPNDWTYQPREQRPASY 1202

  Fly  1211 QTYP 1214
            ...|
  Fly  1203 AAPP 1206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dispNP_524734.2 Patched <444..1111 CDD:280598 150/828 (18%)
MMPL 457..627 CDD:304422 43/191 (23%)
TM_PBP1_branched-chain-AA_like 964..>1109 CDD:294309 35/151 (23%)
ptcNP_523661.2 2A060602 17..1134 CDD:273338 230/1217 (19%)
MMPL 454..598 CDD:304422 39/179 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460574
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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