DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment disp and Ptr

DIOPT Version :9

Sequence 1:NP_524734.2 Gene:disp / 44274 FlyBaseID:FBgn0029088 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001246145.1 Gene:Ptr / 35546 FlyBaseID:FBgn0262867 Length:1169 Species:Drosophila melanogaster


Alignment Length:940 Identity:178/940 - (18%)
Similarity:307/940 - (32%) Gaps:323/940 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 KMDNHCNEIPHCRAPEECKRLNIVFNVLNFLTDFSFIKSNDSNVYLKYAMIFIPVAQSNRLLPLF 413
            :.:|.|.|             |.:.|:...:.|   |::...|  |.:..:|.||.....|.|:|
  Fly   145 RWENECFE-------------NDILNLDALMDD---IEAGQLN--LTFPFMFNPVTWDAHLFPVF 191

  Fly   414 HEWEDVELINELVEVVAMDL--------------GLENELFNELLLTDVWLVSLGGTF------- 457
            .....:...|.::.|.|:.|              |.|   :.|..|..|......|.|       
  Fly   192 FGGTKLTEDNYVISVPAIQLVYFVTADTKRQDAKGAE---WEETFLRVVGNAENSGQFKHISVSY 253

  Fly   458 -------------------VMASVWLYTG---------------SAFITLMSCVAICFSLGLAYF 488
                               ..:|.:|..|               ..|:.||..|:...:. ||.|
  Fly   254 FASRTLDHELEKNTKTVVPYFSSTFLLMGLFSIITCMMGDAVRSKPFLGLMGNVSAIMAT-LAAF 317

  Fly   489 FYAIVLEFEFFPYMNLLAVVVIIGIGADDVFLFLKIWHCVLTERFSNRCTLTTQSQSALPTLENS 553
            ..|:....||.. :||.|..::||||.||.|:.|..|.               ::::.:|..|. 
  Fly   318 GLAMYCGIEFIG-INLAAPFLMIGIGIDDTFVMLAGWR---------------RTKAKMPVAER- 365

  Fly   554 DHTESLENIMALTMRHAAASMFVTSLTTAGAFYASYSSSITAIKCFGIFAGTVVVTNYLLMITWL 618
                     |.|.|..||.|:.:||:|...:|.....|...:::.|..::...|...:|..||:.
  Fly   366 ---------MGLMMSEAAVSITITSVTDFISFLIGIISPFRSVRIFCTYSVFAVCFTFLWHITFF 421

  Fly   619 PASVSI--------MERLFATRMSCHHPMSIKLIHACKKSINRFCQMFEECITKSIMNYAYLWLL 675
            .|.::|        :..:|..|:   .|||:.:                    |...|:.|. .:
  Fly   422 AACMAISGYRERKNLHSIFGCRV---QPMSVAI--------------------KEKRNFLYK-AI 462

  Fly   676 IFGALGASSAVIVFWYPGLQLPEKSHFQLFVSKHPFEVYSSLKQQFWFEKPLQAYENFKMHMHFV 740
            :.|.:.|:.       |...:..|.|..:                .:|:..:.|..|.|      
  Fly   463 MAGGIDAND-------PDNPIDNKDHMLM----------------AFFKDKMAAVINNK------ 498

  Fly   741 WGVQAVDDGDYTNPNSYGHLHYDNNFNVSSRPAQLWILDFCQSVRQQPFYKETLGMLLPNCF-IE 804
                                               |    |:::....|....:|.    |: |.
  Fly   499 -----------------------------------W----CKAIIILAFASYLVGA----CYGIT 520

  Fly   805 NLIDYMKRRCIDDMDSTRK---DRSPCCDAQFPFEPHIFEYCLPQSISNMYDTTFFRPGVAGPKF 866
            .:.:.::||.:...||...   ||......:||:...:.                    :|||..
  Fly   521 QIKEGLERRKLSREDSYSVEFFDREDDYYREFPYRMQVI--------------------IAGPLN 565

  Fly   867 AEAPRLETEDYLGMSGNESAEYSTNGSFTPLLVKALVIEFESNVAYSTIYANIRQ-FYESV-EHW 929
            ...|.::.:.....|..|...|.|:..:|...:::.:...|.|.....:..:..| |.::| |||
  Fly   566 YSDPLVQEQVENLTSTLEHTSYVTSRRYTESWLRSFLSFLERNNELLNVTVDDEQTFIDAVKEHW 630

  Fly   930 FQMQLKTAPPELQGGWFTSDLKF----------------YNVQDT-------------------- 958
            .          ..|..|:.|::|                .|:.||                    
  Fly   631 L----------FPGNPFSLDVRFNEDETQIIASRFLIQAVNITDTNHEKEMVRDLRQICKDSPLN 685

  Fly   959 --LSHDTFV--------------AICLAMAASLAVLLCFTVNILISI---YAVLTVSLSIFNTVA 1004
              :.|..||              |:.:.....:.:...|..|||.|:   ::|:::.|.:...:|
  Fly   686 ASIFHPYFVFFDQFELVRPVSLQAMVIGAIIMMIISFVFIPNILCSLWVAFSVISIELGVAGYMA 750

  Fly  1005 VLILLGWQLNILESIAVST---AIGLAVDFSLHYGIHYRMSPVKERLAATQFVLSRIIGPTVMAA 1066
            :     |.:| |:||::..   .||.:|||:.|....|..|..:...|..:..|..:..|.:..:
  Fly   751 L-----WDVN-LDSISMINLIMCIGFSVDFTAHICYTYMSSKKRSPKARVREALHSLGLPIIQGS 809

  Fly  1067 TTTGLAGGIMMASNILPYIQIGVFLVVVMIVSWF---YATFFLMSLLRVAGPQHGFLELKWPLWS 1128
            ::|.|  ||:.......||.: ||..:|.:|.:|   :..|.|..||.:.||....      .|:
  Fly   810 SSTIL--GIVALLLAQSYIFL-VFFKMVFLVIFFGAMHGLFLLPVLLSLFGPGSCL------TWT 865

  Fly  1129 KRSSGSSKFYERKPSQVIASEQLLTPTSSA 1158
            .:..||    :.:....:...||..|.|.:
  Fly   866 GKDDGS----DAEVDDGLDDRQLEKPFSQS 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dispNP_524734.2 Patched <444..1111 CDD:280598 146/782 (19%)
MMPL 457..627 CDD:304422 46/218 (21%)
TM_PBP1_branched-chain-AA_like 964..>1109 CDD:294309 40/167 (24%)
PtrNP_001246145.1 Patched 53..845 CDD:280598 165/882 (19%)
Sterol-sensing 295..442 CDD:289145 43/173 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460575
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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