DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment disp and Ptchd4

DIOPT Version :10

Sequence 1:NP_524734.2 Gene:disp / 44274 FlyBaseID:FBgn0029088 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_017452249.2 Gene:Ptchd4 / 301271 RGDID:1563020 Length:904 Species:Rattus norvegicus


Alignment Length:656 Identity:124/656 - (18%)
Similarity:225/656 - (34%) Gaps:183/656 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   576 VTSLTTAGAFY---ASYSSSITAIKCFGIFAGTVVVTNYLLMITW------LPASVSIMERLFAT 631
            ::..|.||.|:   ..|:|::..|..|.:..||..|  :.|:..|      ||....:.:.....
  Rat   332 ISIATAAGIFFITDGKYNSTLLGIPFFAMGHGTKGV--FELLSGWRRTKENLPFKDRVADAYSDV 394

  Fly   632 RMSCHHPMSIKLI--------HACKKSINRFCQMFEECITKSIMNYAYLWLLIFGALGASSAVIV 688
            .::.....|:..|        ....:::..|||  ..|:: .::||.|    ||...|   :.:|
  Rat   395 MVTYTMTSSLYFITFGMGASPFTNIEAVKIFCQ--NMCVS-ILLNYFY----IFSFFG---SCLV 449

  Fly   689 FWYPGLQLPEKSHFQLFVSKHPFEVYSSLKQQFWFEKPLQAYENFKMHMHFVWGVQAVDDGDY-- 751
            |   ..||.:..:..:|..|.|...|..       .||             ||....:.||..  
  Rat   450 F---AGQLEQNRYHSIFCCKIPSAEYLD-------GKP-------------VWFQTVMSDGHQQT 491

  Fly   752 ----TNPNSYGHLHYDNNF----------NVSSRP---------------AQLWILDFCQ----- 782
                |||  |.| |:..:|          |:..:|               ..|.|.|...     
  Rat   492 SHHETNP--YQH-HFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGCLQISDGASIINLL 553

  Fly   783 ----------SVRQQPF--YKETLGMLLPNCFIENLIDYMKRRCIDDMDSTRKDRSPCCD--AQF 833
                      .|:|:.|  |...:|.     ::...::|..       .|.::|....|.  ...
  Rat   554 ASDSPSVSYAMVQQKYFSNYSPVIGF-----YVYEPLEYWN-------SSVQEDLQRLCSGFTAV 606

  Fly   834 PFEPHIFEYCLPQSISNMYDTTFFRPGVAGPKFAEAPRLE--TEDYLGMSGNESAEYSTNGSFTP 896
            .:....:::....:||....|.|.  .|....|.:.|..:  ..|.:         :|..|.   
  Rat   607 SWVEQYYQFLKASNISANNKTDFI--SVLQSSFLKKPEFQHFRNDII---------FSRAGD--- 657

  Fly   897 LLVKALVIEFESNVAYSTIYANIRQFYESVEHWFQMQLKTAPPELQGGWFTSDLKF--YNVQDTL 959
                      |:|:..|.:|...|...:..:...::..|..|..|     :..::|  :|.....
  Rat   658 ----------ENNIIASRLYLVARTSRDKQKEVIEVLDKLRPLSL-----SKSIRFIVFNPSFVF 707

  Fly   960 S-HDTFVAICLAMAASLAVLLCFTVNILISIYAVLTVSLSIFNTVAVLILLG----WQLNILESI 1019
            : |::.......:.|...|||...:...:.|:.:....|.:..|...|.:||    |.:: ::.|
  Rat   708 TDHNSLSVTVPVLIAGFGVLLVLVLTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVD-MDCI 771

  Fly  1020 AVSTAIGLAVDFSLHYGIHYRMSPVKERLAATQFVLSRIIGPTVMAATTTGLAGGIMMASNILPY 1084
            ::     |.:.::|::.|.:....:...:.||:...::.|..::.       ..|..:..||..:
  Rat   772 SI-----LCLIYTLNFAIDHCAPLLYTFVLATEHTRTQCIKSSLQ-------EHGTAILQNITSF 824

  Fly  1085 IQIGVFLVVVMIVSWFYATFFLMSLLRVAGP---QHGFLELKWPLW------SKRSSGSSKFYER 1140
            : ||  ||.::.|. ...||.|...|.:.|.   .|.|:.|  |::      ||:.....|..:|
  Rat   825 L-IG--LVPLLFVP-SNLTFTLFKCLLLTGGCTLLHCFVIL--PVFLTFFPPSKKHHKKKKRAKR 883

  Fly  1141 KPSQVI 1146
            |..:.|
  Rat   884 KEREEI 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dispNP_524734.2 MMPL <395..1115 CDD:440656 113/614 (18%)
Ptchd4XP_017452249.2 None

Return to query results.
Submit another query.