DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment disp and ptd-2

DIOPT Version :9

Sequence 1:NP_524734.2 Gene:disp / 44274 FlyBaseID:FBgn0029088 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_505396.2 Gene:ptd-2 / 179307 WormBaseID:WBGene00004211 Length:936 Species:Caenorhabditis elegans


Alignment Length:1185 Identity:279/1185 - (23%)
Similarity:450/1185 - (37%) Gaps:359/1185 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YYHVLARRPYLVVVSIAVYCVACIIVALVLN-KLPDFSDPTLGFETRGTKIGE-RLTAWYNLLQE 74
            |.||:...|.:.:|......|.....||..| ::.|| |||.||||||:.:.. |:|     |:.
 Worm    15 YAHVVIDYPIICIVLTGTISVILTSWALSFNYQVIDF-DPTKGFETRGSPLSSARMT-----LEA 73

  Fly    75 TDHHGALFSNPSDL-WERRRVEQGYVETKLHPNHRRRKNKHKNRNKNKRRKEQNQSSHEHHDVAQ 138
            ...|.|  ||.:.| |        |.|.  .|..|:|                            
 Worm    74 MKPHQA--SNENILRW--------YFEQ--DPGRRKR---------------------------- 98

  Fly   139 KMMQFKKRLKATSSPSPNLGFDTWIGDSGVFRDYEITNDSASSSLEPTRRTEQIEYGHNTTSVDE 203
                                              .|.||: :::|:|      |...::...||.
 Worm    99 ----------------------------------YIKNDT-TTTLDP------ITVNYDDYGVDS 122

  Fly   204 EEHQQRVQTKKSTWRLLKQAATLPTDGWADMHRRQPIEGFFCDSSPRKEYSHFVVQRIGPNATDS 268
            |.:...::.....:..:.:|  ||.|                    ..||...::.|:  ::.|.
 Worm   123 EPNSSDLEDPCEMYGAIGKA--LPYD--------------------MIEYLGKIMIRV--SSYDD 163

  Fly   269 LFDLNGLLAMCQLQDQITE--------------------VPSYRAFCEPEMLTTECCRPWSLPNY 313
            ||.||.:..:||: |.|.:                    :|.|          |.|      || 
 Worm   164 LFSLNVMKHLCQI-DSIVDNLIIESNYTNPIQALKHSLNIPYY----------TTC------PN- 210

  Fly   314 AAMLANKSSCFDLTTEDVTSLHTLLLGCYEYFHDLKMDNHCNEIPHCRAPEECKRLNIVFNVLNF 378
               :..::||..|...|:.:...||..|       |:::         ..|.|...:|     |.
 Worm   211 ---MTTQNSCEALNENDILNFRYLLQKC-------KINS---------TDEVCSAFSI-----NQ 251

  Fly   379 LTDFSFIKSNDSN----VYLKYAMIFIPVAQSNRLLPLFHEWEDVE-------LINEL------- 425
            :.::...|.|.|:    |.||..|                 |...|       ||::|       
 Worm   252 VNNWLLTKGNSSDFIIVVVLKVTM-----------------WNGAENRDFYDDLIDKLKDHLERN 299

  Fly   426 --VEVVAMDLGLENELFNELLLTDVWLVSLGGTFVMASVWLYTGSAFITLMSCVAICFSLGLAYF 488
              ..:..:.|.::|::|.|.:.||....:.....|.:...:|:.|...|.:..:.:..|.|:|:|
 Worm   300 PHTRMAGIALNMKNKVFQERIQTDSLFAAFSALLVFSCFLIYSRSIIFTCIILMVVTLSSGVAFF 364

  Fly   489 FYAIVLEFEFFPYMNLLAVVVIIGIGADDVFLFLKIWHCVLTERFSNRCTLTTQSQSA-LPTLEN 552
            .|.:||..:|||::|||.||::|.|||||.||.| :::....||.|:   |..:..|. :|....
 Worm   365 IYTVVLGIDFFPFINLLVVVILISIGADDAFLLL-VYYRREVERMSH---LEYKVGSIYIPLYRE 425

  Fly   553 SDHTESLENIMALTMRHAAASMFVTSLTTAGAFYASYSSSITAIKCFGIFAGTVVVTNYLLMITW 617
            ||   .|...:.|::.|:..||||||||||..|..:.||.:..::|||::|...|..||:|::..
 Worm   426 SD---LLSRSLRLSLHHSLVSMFVTSLTTASTFLTNLSSPVIVLRCFGVYAALTVTVNYILVVLI 487

  Fly   618 LPASVSIMERLFATRMS--CHHPMSIKLIHACKKSINRFCQMFEECITKSIMNY---AYLWLLIF 677
            ||.:: |:.|....::|  ...|..|: .|:          .|...||::...:   .::..||.
 Worm   488 LPGAI-ILSRPIRKKLSRGDEEPEKIE-SHS----------YFASKITETTHYFRFGIFICSLIM 540

  Fly   678 GALGASSAVIVFWYPGLQLPEKSHFQLFVSKHPFEVYSSLKQQFWFEKPLQAYENFKMHMHFVWG 742
            ..|   |..|:|..|||:.|:.:..:|.|..:..|.:.:....|.|    |...:.::..:||:|
 Worm   541 TGL---SLFIIFQNPGLKTPQTNPTKLLVDSNIHEYFDNNVHHFNF----QWQRSARLVKNFVFG 598

  Fly   743 VQAVDD----GDYTNPN-SYGHLHYDNN----------FNVSSRPAQL-------WILDFCQSVR 785
            |.|:.:    ..|..|: ::...||..:          .|:.|:..||       |.....|:..
 Worm   599 VDAIKETSTLSPYNKPSKNFSQAHYSLDTDKLDFYRRIVNLESKKYQLVNYTHVSWADKILQANE 663

  Fly   786 QQPFYKETLGMLLPNCFIENLIDYMKRRCIDDMDSTRKDRSPCCDAQFPFEPHIFEYCLPQSISN 850
                          :||.||      :..|.:...:...|:.....|||                
 Worm   664 --------------SCFSEN------KTIIHECILSASVRNKNLIHQFP---------------- 692

  Fly   851 MYDTTFFRPGVAGPKFAEAPRLETEDYLGMSGNESAEYSTNGSFTPLLVKALVIEFESNVAYSTI 915
              |.....||       :.|.::.:                     |.|....|...||......
 Worm   693 --DDFSVIPG-------DGPFIDQD---------------------LKVVGYFISIPSNQKLQVD 727

  Fly   916 YANIRQFYESVEHWFQMQLKTAPPELQGGWFTSD----------LKFYNVQDTLSHDTFVAICLA 970
            ...|..|::.:|...: |:|.|         |||          .:||::...|...:|.::.::
 Worm   728 TEMIGSFFQEIEESCK-QIKNA---------TSDSVLCLSSTEITRFYDIVSQLRSSSFTSVAIS 782

  Fly   971 MAASLAVLLCFTVNILISIYAVLTVSLSIFNTVAVLILLGWQLNILESIAVSTAIGLAVDFSLHY 1035
            :...|.|::..|..|.:||.:.:.:...|..|||.||||||||:::||..:...|||:.|::|||
 Worm   783 LGICLIVIIACTRVIKLSIISSVIIFFVILWTVASLILLGWQLSVVESTILIITIGLSFDYTLHY 847

  Fly  1036 GIHYRMS---PVKERLAATQFVLSRIIGPTVMAATTTGLAGGIMMASNILPYIQIGVFLVVVMIV 1097
            .:..|.:   |..|:|.:..   |......|..:.|..|||..::.|....:.|||..||::.|.
 Worm   848 VVAIRDTKCVPASEKLTSAH---STAGIACVFGSLTLFLAGCPLLFSQTASFYQIGTMLVILGIT 909

  Fly  1098 SWFYATFFLMSLLRV 1112
            |.|.|:..|.|.|.|
 Worm   910 SLFGASIVLPSFLMV 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dispNP_524734.2 Patched <444..1111 CDD:280598 184/707 (26%)
MMPL 457..627 CDD:304422 63/170 (37%)
TM_PBP1_branched-chain-AA_like 964..>1109 CDD:294309 49/147 (33%)
ptd-2NP_505396.2 COG1033 <332..925 CDD:223964 184/698 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160168000
Domainoid 1 1.000 117 1.000 Domainoid score I3704
eggNOG 1 0.900 - - E1_KOG3664
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14133
Inparanoid 1 1.050 260 1.000 Inparanoid score I1916
Isobase 1 0.950 - 0 Normalized mean entropy S6166
OMA 1 1.010 - - QHG49175
OrthoDB 1 1.010 - - D1156918at2759
OrthoFinder 1 1.000 - - FOG0002571
OrthoInspector 1 1.000 - - otm14667
orthoMCL 1 0.900 - - OOG6_105747
Panther 1 1.100 - - LDO PTHR45951
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3249
SonicParanoid 1 1.000 - - X2285
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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