DRSC/TRiP Functional Genomics Resources

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Protein Alignment disp and ptr-3

DIOPT Version :9

Sequence 1:NP_524734.2 Gene:disp / 44274 FlyBaseID:FBgn0029088 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_493718.2 Gene:ptr-3 / 173426 WormBaseID:WBGene00004218 Length:927 Species:Caenorhabditis elegans


Alignment Length:1003 Identity:188/1003 - (18%)
Similarity:341/1003 - (33%) Gaps:316/1003 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 FFCDSSPRKEYSHFVVQRIGPNATDSLFDLNGLLAMCQLQDQI--------------TEVP-SYR 292
            ||.:....|....|:..::|.|          :|.:.||.|.:              ::.| ::.
 Worm    82 FFNNHGEPKAIYAFITSKVGDN----------MLGISQLNDTVHVLDTISRDFYLKTSQGPKNFE 136

  Fly   293 AFCEPEMLTTECCRPWSLPNYAAMLANKSSCFDLTTEDVTSLHTLLLGCYEY----FHDLKMDNH 353
            .:|....|..|..:.:    |:.||.:.....|.:..|:....|.:||...|    |..:|:...
 Worm   137 EYCSGFCLLNEPVKHF----YSGMLISGQHGTDFSHLDLGYPITTVLGTKLYMDPNFFGVKVTTS 197

  Fly   354 CNEI------------PHCR-APEECKRLNIVFNVLNFLTDF-SFIKSNDSNVYLKYAMIFIPVA 404
            .|::            .|.: .|...:.:::|  ||.|.::. ..:...|...|           
 Worm   198 NNKVESIADGNTKLFGDHTKQEPNNIREVSLV--VLQFRSELGDEVTPEDLRNY----------- 249

  Fly   405 QSNRLLPLFHEWEDVELINELV--------EVVAMDLGLENELFNELLLTDVWLVSLGGTFVMAS 461
             .:::|...|:....|.||..:        |:|...|.|...|   ::...:..|....|||:::
 Worm   250 -EHQILDYIHDEYQSEHINVYILTDSYITEEIVRAGLTLLPFL---VIGFTIMAVFSSITFVVSA 310

  Fly   462 VW---LYTGSAFITLMSCV----AICFSLGLAYFFYAIVLEFEFFPYMNLLAVV--VIIGIGADD 517
            .:   |......:.:|:||    |...||| |.||..       |.:.::|.|.  :::.||.||
 Worm   311 YYTKQLNFYKPILAVMACVCPFMACGASLG-AMFFIG-------FRFGSILCVTPFLVLAIGVDD 367

  Fly   518 VFLFLKIWHCVLTERFSNRCTLTTQSQSALPTLENSDHTESLENIMALTMRHAAASMFVTSLTTA 582
            .:|....|         .|.|...:..:...::     ...|:|.:.........|:.:|::|.|
 Worm   368 SYLMANAW---------QRITCHRRKHARFESV-----NVELKNRITEMFIETGPSITITTITNA 418

  Fly   583 GAFYASYSSSITAIKCFGIFAGTVVVTNYLLMITWLPASVSIMERL-FATRMSCHHP-------- 638
            .||....::....|:.|.|.....|:|:::..||:..|.::::.|. ....:....|        
 Worm   419 LAFGIGATTPAAEIQLFSIGNALAVITDFVFTITFYGALMAVVGRYEIEQELKTQKPLPESESPS 483

  Fly   639 -------MSIKLIHACKKSINRFCQMFEECITKSIMNYAYLWL--LIFGALGASSAVIVFWY--- 691
                   |....:..||     |.:|... :.|.:.|   .|:  ::.|.|.      |:||   
 Worm   484 ETSSTGSMRSSELDDCK-----FRRMIAN-VCKFLTN---TWVCSVVLGLLA------VYWYICI 533

  Fly   692 -----------PG-LQLPEKSHFQLFVSK--HPFEVYSSLKQQFWFEKPLQAYENFKMHMHFVWG 742
                       |. |.|.|.:..::|..:  |....||:                       .| 
 Worm   534 VGTVNIKSELSPNKLFLAESNIVEIFKQRKSHIIPYYSA-----------------------CW- 574

  Fly   743 VQAVDDGDYTNPNSYGHL---------------HYDNNFNVSSRPAQLWILDFCQSVRQQPFYKE 792
            |...:.||..|||....|               .|...|         |:.|:      :.|.|:
 Worm   575 VLVENPGDINNPNQRAKLEELIESFEALPSANGRYSTKF---------WLRDY------EDFLKQ 624

  Fly   793 TLGMLLPNCFIENLIDYMKRRCIDDMDSTRKDRSPCCDAQFPFEPHIFEYCLPQSISNMYDTTFF 857
            :..:.||                  |:....:                |..:..:::.....|..
 Worm   625 SEEIDLP------------------MEEEEDE----------------ELAIQFTVNGSQVVTPS 655

  Fly   858 RPGVAGPKFAEAPRLETEDYLGMSG----NESAEYSTNGSFTPLLVKALVIEFESNVAYSTIYAN 918
            :|...|.:..:.  ||..::....|    |||....:....|.....:.::::.:.       |.
 Worm   656 QPFGQGNELRQF--LEWPEFSFWKGFIQVNESTYQMSKFLVTTAYHGSDLVDWSNR-------AK 711

  Fly   919 IRQFYESVEHWFQMQLKTAPPELQGGWFTSDLKFYNVQDTLSHDTFVAICLAM--AASL----AV 977
            :...:.||..  |.:.|:    |....:..|.||.::.:|:|.   |||..|:  .||:    |:
 Worm   712 LLNEWRSVAD--QDKFKS----LNVTVYEEDAKFLDLIETMSP---VAIQSALWTFASMFLVAAL 767

  Fly   978 LLCFTVNILISIYAVLTVSLSIFNTVAVLILLGWQLNILESIAVST---AIGLAVDFSLHYGIHY 1039
            .:.....:.::.:::|:.||.:|.      ::.|....|:.|.:|.   :||.:||...|...|:
 Worm   768 FISHPPTLFVATFSILSTSLGVFG------IMSWWGADLDPIMMSATVMSIGFSVDIPSHVSYHF 826

  Fly  1040 RM-----SPVKERLAATQFVLSRIIGPTVMAATTTGLAGGIMMASNILPYIQIGVFLVVVMIVSW 1099
            ..     |.::.||   |..:..:..|...|:.:|.|.                       ::|.
 Worm   827 YQTAKDTSDIRRRL---QMTIEAVGFPIFEASLSTSLC-----------------------VMSL 865

  Fly  1100 FY-----ATFF--LMSLLRVAGPQHGFL 1120
            |:     |..|  .|.|:.|.|..||.|
 Worm   866 FFVDLNMAQIFAKCMLLVVVIGMVHGML 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dispNP_524734.2 Patched <444..1111 CDD:280598 139/750 (19%)
MMPL 457..627 CDD:304422 40/178 (22%)
TM_PBP1_branched-chain-AA_like 964..>1109 CDD:294309 34/165 (21%)
ptr-3NP_493718.2 Patched 48..904 CDD:308203 188/1003 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6166
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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