DRSC/TRiP Functional Genomics Resources

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Protein Alignment tio and tshz1

DIOPT Version :9

Sequence 1:NP_001260679.1 Gene:tio / 44272 FlyBaseID:FBgn0028979 Length:1024 Species:Drosophila melanogaster
Sequence 2:NP_001036211.1 Gene:tshz1 / 369196 ZFINID:ZDB-GENE-030820-3 Length:1158 Species:Danio rerio


Alignment Length:881 Identity:172/881 - (19%)
Similarity:279/881 - (31%) Gaps:318/881 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 SPALDFSRKRPKSHGDDDQEEDQEQDQEQEQEQEPDHDVQCDNGPLDLSVSTGKRQESVSPPARK 207
            ||..|.|     .|..|.:....::.|::|:.::.|.|.:       ||:     |:|::     
Zfish    95 SPLSDTS-----DHLADFKSTSSKEGQDKEEVEDMDTDAK-------LSL-----QDSLA----- 137

  Fly   208 IPRSISADYKSPLPPGSWMPPINPYLAAVAAKTGGL--------GYSKLAPSEASKALEKMTEMS 264
               .:.|.|.:.:...||.......:.:.......:        |.:.:|.|.||.........|
Zfish   138 ---QMKAVYANLISDASWSSITKDIMKSKQVSASSINSTSSSHKGNNSVANSHASTIASSGASSS 199

  Fly   265 RLETSPT------AARSLGATSSVGAGVPAGASSNSGGRHSAW---------------------- 301
            ...::.|      ::.|..||:...|.......:||||....|                      
Zfish   200 SNASASTKTNVTQSSNSTKATTLTNANNGTINGANSGGVAYDWHQAALAKTLQHTPYHLMPEPSL 264

  Fly   302 --------QSHWLNKGADTAKDVFKCVWCKQSFSTLANLTAHMKETQHCGVQIPSPLPTGGVGTP 358
                    |::.|.....|....|:|..|..::.||..||.||.||.|                 
Zfish   265 FSTVQLYRQNNKLYGPVFTGASKFRCKDCSAAYDTLVGLTVHMNETGH----------------- 312

  Fly   359 SAPPPTRLATSASNSACSSSSSSTSSSSNSSKSELNMLIKETMPLPRKLVRGQDVWLGKGAEQTR 423
                                    ....|..|.| :...|.:.|..|.|:..:      |.|..:
Zfish   313 ------------------------YRDDNKDKEE-DRGKKWSKPRKRSLMEME------GKEDAQ 346

  Fly   424 QILKCMWCGQSFRSLAEMTSHMQETQHYTNIISQEQIISWKS---GDERER-------------- 471
            ::||||:||.||.||.:::.||.:|:||..:..:|.:.:..|   ...::|              
Zfish   347 KVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPMPALASKLVPSTKKRVFQDLMSPCSPDSI 411

  Fly   472 PTNTGVPSTSTAAPSSPSCTAPSVSA----------------------VLTCKVCDQAFGSLKEL 514
            .:..|:|...||....|..:.|.|:|                      :|.|..|..:..:|::|
Zfish   412 SSTPGIPLAETAPTKDPKISNPYVTANNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQL 476

  Fly   515 STHMAQKSHYKESPAPSASPPAAGTGNPKRGRQNRNEKRKKSLPVRKLLELERSGSNSSLDSALK 579
            :.||....|:                                      |::..|.|.........
Zfish   477 TAHMMVTGHF--------------------------------------LKVTNSASKKGKQLVFD 503

  Fly   580 PLRDFAAATKITCEKCGSKIETALFVEHIRKCLGESIPIPPRRSNAGVDRLPSPSLGLGAEKP-- 642
            |:                 :|..:          :|||:||..:     |||:|::....:.|  
Zfish   504 PV-----------------VEEKI----------QSIPLPPTTT-----RLPAPAIKSQPDSPIH 536

  Fly   643 PSVLNALEQLIEKSFES-----------------RTSRTMTHGGY-----SEAGTPLGASILKRL 685
            ||:::..::|.|:.||.                 ..|..::|..|     .|.....|..|||.|
Zfish   537 PSIMDDRKELEEEKFEEPEEKKIKQEKEDPSERVEKSEKLSHYKYLREEDLEESPKGGLDILKSL 601

  Fly   686 GIEDSSDYTKPLMDAQAMHLLRSSFASRDRSASESSSASRVES-------------SYTPDRQQA 737
            ....||..:|............|..|:.....|..||...::|             |.|.|  .:
Zfish   602 ENTVSSAISKAQTGTPTWGGYPSIHAAYQLQGSVKSSIPAIQSVQIQPTFNASSLKSLTSD--SS 664

  Fly   738 TPHKSPDTPAPPPPPPPTIKAEPLEAEPLVGCDREGCSPRQQIQVKKE--------FSMEACRES 794
            |...||.:|:|||.....:.|.....|.:.|          :|..||:        .|.....|.
Zfish   665 TLIHSPSSPSPPPNHKSNVLAMEELVEKVTG----------KIPSKKDRDEKLTERNSKHLTAEL 719

  Fly   795 PRSVSKS----PAPQTERSPPDNGSLLALNSMFDQLSGVENS----GNNNSGHCFNN-------- 843
            |..|.|.    |.|.....|..||::       |:  .:|::    |.....|..|.        
Zfish   720 PSPVLKERKDLPKPDDLTKPTKNGTV-------DK--DLEHTPVREGEYKESHADNPIKNGTDAL 775

  Fly   844 ----NNSCSSV------SAQKPKAHPLAALQKLCET 869
                :|.|.::      |.::|..:||:|||.:..|
Zfish   776 KTQVSNGCGNLGIITDHSPEQPLVNPLSALQSIMNT 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tioNP_001260679.1 zf-C2H2_2 <317..>344 CDD:289522 12/26 (46%)
C2H2 Zn finger 319..341 CDD:275371 10/21 (48%)
C2H2 Zn finger 428..450 CDD:275371 11/21 (52%)
zf-C2H2_4 927..949 CDD:290605
tshz1NP_001036211.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..126 8/35 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..228 11/57 (19%)
C2H2 Zn finger 290..312 CDD:275371 10/21 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..341 9/78 (12%)
C2H2 Zn finger 351..373 CDD:275371 11/21 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..425 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..573 13/61 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 656..681 10/26 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..748 15/73 (21%)
homeodomain 964..1032 CDD:238039
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580302
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 101 1.000 Inparanoid score I4973
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6467
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12487
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4785
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
77.070

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