DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tio and tshz2

DIOPT Version :10

Sequence 1:NP_524733.2 Gene:tio / 44272 FlyBaseID:FBgn0028979 Length:1024 Species:Drosophila melanogaster
Sequence 2:XP_068073039.1 Gene:tshz2 / 100332862 ZFINID:ZDB-GENE-100322-2 Length:1030 Species:Danio rerio


Alignment Length:1127 Identity:221/1127 - (19%)
Similarity:346/1127 - (30%) Gaps:415/1127 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 ESPALDFSRKRPKSHGDDDQ-------EEDQEQDQEQEQEQEPDHDVQCDNGPLDLS-------- 191
            :|..|:..|   ||:..||:       ||::.::..|.:|:..:.....|....|:.        
Zfish    14 QSAILELHR---KSYEPDDEVGVQESIEEEEGENAMQTEEENSERPTSKDKDDKDIDNKSSYSFQ 75

  Fly   192 ---VSTGKRQE-----SVSPPARKIPRSISADYKSPLPPGSWMPPINPYLAAVAAKTGGLGYSKL 248
               ||....||     .:|..:.::     :|:|:. ||||             .|......|||
Zfish    76 NSPVSVLSNQEVELESRLSDGSDRL-----SDFKTS-PPGS-------------QKDTETQSSKL 121

  Fly   249 APSEASKALEKMTEMSRLETSPTAARSLGATSSV-GAGVPAGASSNSGGRHSA--WQSHWLNK-- 308
             ..:...:||||........|.:....:|....| ..|..|...|.:|...|.  |....|:|  
Zfish   122 -KDDMHSSLEKMRAAYANFLSDSYWSKIGLDLKVANTGSKANCDSTNGSTKSEFDWHQDALSKTL 185

  Fly   309 ----------------------------GA-DTAKDVFKCVWCKQSFSTLANLTAHMKETQHCGV 344
                                        || .|....|:|..|..::.||..||.||.::.|   
Zfish   186 QQTLSPKPVSKPNLFSSVHLYRQNSKACGAVFTGASRFRCKDCSAAYDTLVELTVHMNKSGH--- 247

  Fly   345 QIPSPLPTGGVGTPSAPPPTRLATSASNSACSSSSSSTSSSSNSSKSELNMLIKETMPLPRKLVR 409
                                    ...::....:.:|||||.|..::..:|              
Zfish   248 ------------------------YQDDNHSRQNIASTSSSKNRKRNLQDM-------------- 274

  Fly   410 GQDVWLGKGAEQTRQILKCMWCGQSFRSLAEMTSHMQETQHYTNIISQEQI---------ISWKS 465
                   :|.|..:::||||:||.||.||.:::.||.:|:||..:..:|.|         .:.|.
Zfish   275 -------EGKEDAQKVLKCMFCGHSFDSLQDLSVHMIKTKHYQKVPLKEPIPVITPKLIPPAKKR 332

  Fly   466 GDERERP----TNTGVPSTSTAAPSSPSCTAPS------------------VSAVLTCKVCDQAF 508
            ..|..||    :.|||...:.|..||....||:                  .|.:|.|..|..:.
Zfish   333 AFEATRPCSPDSTTGVSGYTDAQRSSGLANAPNNRYGYQNGASYTWQFETCKSQILKCMECGSSH 397

  Fly   509 GSLKELSTHMAQKSHY--------------------------------------KESPAPSA--- 532
            .:|::|:|||....|:                                      |.||..:|   
Zfish   398 DTLQQLTTHMMVTGHFIKVTNSASKKGKQLALDPLAIEKMQTLAEPTVNELEGEKVSPKSTASGD 462

  Fly   533 ---------SPPAAGTGNPKRGRQNRNEKRKK----SLPVRKLLELERSGSNSSLDSALKPLRDF 584
                     ||..|.....|..:|:..|::..    ..|..:..:||:.||:...| .||.|.: 
Zfish   463 SERATPRDMSPDKAEKNEDKDDKQDEEERKPTDGNFKYPYLREEDLEQQGSSGGGD-ILKSLAN- 525

  Fly   585 AAATKITCEKCGS-------KIETALFVEHIRKCLGESIPIPPRRSNAGVDRLPSPSLGLGAEKP 642
            ..|:.|...:.|:       .|..|..:..:.|....| |.||.:....::....|....|  |.
Zfish   526 TVASAINKAQTGTPSWSAYPSIHAAYQLSGVIKTASFS-PSPPIQLKQNLNHKHRPIAPKG--KF 587

  Fly   643 PSVLNALE----------------------------QLIEK--------------------SFES 659
            ...|..||                            .|:|.                    |.|:
Zfish   588 YQALRGLESFQGHHNSDIKKERGGASDGKESQSSRFDLVENDDSDCQDDSSSSSKLDADCVSEEN 652

  Fly   660 RTSRTMTHGGYSEAGTPL-------GASILKRLGIEDSSDY--------------------TKPL 697
            .|.:......:|:.|.|.       |.|....| :.||.:.                    .||.
Zfish   653 DTIKGKLSPAFSDRGNPSPSPPASNGHSTSSEL-VNDSQEVLSINPLSALQSVLNNHLGKANKPR 716

  Fly   698 MDAQAMHLLRSSFASRDRSASESSSAS---RVESS--YTPDRQ--QATPHKS------------- 742
            .::...|..:|.|:...|...:..|||   |..:|  :|.|.|  ..|.||.             
Zfish   717 PESILSHRTQSIFSELSRGLEKPLSASAAIRASNSFMFTNDDQPIDLTKHKHNKPNSSLLLQSST 781

  Fly   743 ------------------PDTPAPPPPPP---PTIKA-------EPLEAEPLVGCDREG----CS 775
                              |....|.||.|   |.:|.       |.:.:|......|:|    .:
Zfish   782 PMHQKHALSDIADMVKVLPKATTPKPPMPARMPVMKLETDVRRFEDVSSEMYSVHKRKGRQSNWN 846

  Fly   776 PRQQIQVKKEFSMEACRESPRSVSKSPAPQTERSPPDNGSLLALNSMFDQLSGVE----NSG--- 833
            |:..:.::.:|:....:.|......|.....||......:.|::.::...|:.|:    .:|   
Zfish   847 PQHLLILQAQFASSLFQTSEGKYLLSDLGPQERMHISKFTGLSMTTISHWLANVKYQLRKTGGTK 911

  Fly   834 ---NNNSGHCFNNNNSCSSVSAQKPKA----------HPLAALQKL-----CETTDPPSTGLRSA 880
               |.::||.....|.|:| ..:.|.|          ..:..:.||     .:.|:|..:.:.:.
Zfish   912 FLKNMDTGHPVFYCNDCAS-QFRTPSAFISHLENHLGFQIKDMNKLPIEHPTKITEPELSKVLTI 975

  Fly   881 SSAGSSTASATLPSANGNDLVAFSWACNEAVLSASNGGSAGDSSIIKCSYCDTPFASKGAYRHHL 945
            ....|....                             ...||. .||..|...|||..|.:.||
Zfish   976 RPTDSQITE-----------------------------EESDSK-FKCKLCSRTFASNHAVKLHL 1010

  Fly   946 SKVHFVKDAGEDSPRLKSPAVQ 967
            ||.|      ..||...|..|:
Zfish  1011 SKTH------SKSPENHSQFVE 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tioNP_524733.2 zf-C2H2 317..337 CDD:395048 8/19 (42%)
C2H2 Zn finger 319..341 CDD:275371 8/21 (38%)
C2H2 Zn finger 428..450 CDD:275371 11/21 (52%)
zf-C2H2_4 927..949 CDD:464025 11/21 (52%)
tshz2XP_068073039.1 homeodomain 839..907 CDD:238039 10/67 (15%)

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