DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment xmas and tag-115

DIOPT Version :10

Sequence 1:NP_001356948.1 Gene:xmas / 44271 FlyBaseID:FBgn0286809 Length:2079 Species:Drosophila melanogaster
Sequence 2:NP_741494.1 Gene:tag-115 / 178278 WormBaseID:WBGene00006466 Length:331 Species:Caenorhabditis elegans


Alignment Length:369 Identity:88/369 - (23%)
Similarity:137/369 - (37%) Gaps:85/369 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 CADMCPEKERVLREFQRQVAYYELQ------PGSDELICHERALKQYSRSSAD-QETPLPHELRN 259
            |..|||..|...|.....:...|..      |.|..:....:.:|:||||:|| .:...|..||.
 Worm     4 CESMCPVAEINFRSRNHLIDQLEATASTSSGPRSKYVADPTKMVKEYSRSAADTHKYNKPELLRP 68

  Fly   260 ETALHMTMSYLMHEIMDISERQD--PQSHMGDWFHFVWDRTRSIRKEITQQELCSLGAVKLVEQC 322
            ...|..|:.||:.......:|:.  ........|.||.||.||||:::..|.|.....|.|:|:.
 Worm    69 FPVLQHTIDYLLDLYSPFKDRRSAITSKQFASIFSFVSDRLRSIRQDMIMQNLRGDFTVILIEKM 133

  Fly   323 ARFHIHCAARLVDADPSVFDSKINAENLTKC----------------------------LQTLKY 359
            ..|:|........|....:|.|::...|.:|                            |.....
 Worm   134 LPFYIETDGACKMAKCQSYDPKLHDFQLEECFGRWFEEVSNSTDIIPNPLISACFFFRQLHRKSS 198

  Fly   360 MYHDLRIKGVPCPKEAEFRGYIVLLNLADANFLWDIGQLPAELQSCPEVRQAIQFYLALQDTNFV 424
            :.|||.:.....|.|:        .||               :||.     ...||    .:|:.
 Worm   199 ILHDLYLFRRKLPHES--------FNL---------------IQSI-----ISSFY----SSNYR 231

  Fly   425 RFFQLLADKD---TSYLSACILVNYFTRLRVLGLHRLIQAYRSPRKDEVSSLPLSYIAELLSFAS 486
            |||.:....|   ...||.|:.:     ||...:..:..|:::|    |:.||...:::.|.|.:
 Worm   232 RFFDIFQQLDPLLKHSLSDCVSI-----LRQSAMKNISVAFKTP----VARLPSQLLSDWLGFPA 287

  Fly   487 EQE-AADFVQHYGLQINEAGRVVLSRMH-TVETEYK--LPRQYE 526
            ..| ..||::.|.:..:|.|.:::|.:. .||..|:  ..||||
 Worm   288 NLEFFDDFLRLYSVIPDEQGNILISALRPPVEISYQDFSSRQYE 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
xmasNP_001356948.1 RRM_XMAS2 12..82 CDD:409890
SAC3_GANP 205..503 CDD:460911 77/338 (23%)
tag-115NP_741494.1 SAC3_GANP 7..305 CDD:474128 77/338 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.