DRSC/TRiP Functional Genomics Resources

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Protein Alignment xmas and F20D12.2

DIOPT Version :9

Sequence 1:NP_001356948.1 Gene:xmas / 44271 FlyBaseID:FBgn0286809 Length:2079 Species:Drosophila melanogaster
Sequence 2:NP_501328.1 Gene:F20D12.2 / 177589 WormBaseID:WBGene00017642 Length:1116 Species:Caenorhabditis elegans


Alignment Length:985 Identity:246/985 - (24%)
Similarity:410/985 - (41%) Gaps:240/985 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FVLRPR-RMTCTVSYASEDEAARALLDG---------ASFQGHLFDISYADNETAPAQKTEEWVD 96
            |.:||| ||   :..|..:...|...:|         .:||.:|.||    ...||..|      
 Worm    94 FAIRPRQRM---IPPAGANSLFRRPREGTPDGSENRNTNFQKNLNDI----KSEAPLGK------ 145

  Fly    97 PDIQAELSALQSGWRNE----YGSGKP-------------IKKPQNGS---------SGSGGSSM 135
                  ::..|.|.::|    :|..||             |||....|         .|.|..|.
 Worm   146 ------VNFSQFGRKDEIKSFFGRAKPKIEEESIDETDHVIKKEAPPSMFGVTLAAPKGFGSISS 204

  Fly   136 L---------------PAIPVGPATAPVSRDRTPAQLRD---LENM-MRRPAHTSE--EKFSVLD 179
            |               |:....|| .|.:|...|:.|.:   :|.: |.:..|..:  ||:.:..
 Worm   205 LTEKPSSSIKSFGSWKPSSRSSPA-PPDTRQIEPSGLEESKLIEKLAMLKGKHCPDDFEKYQIFV 268

  Fly   180 ARDKLLRLNRTQHKLSGATQGHCADMCPEKERVLREFQRQVAYYELQPGSDELICHERALKQYSR 244
            .||..|...|..:.........|.:||.||||..|..|:.|:.||....|.: :.||..:|||:|
 Worm   269 KRDGFLCQLREINSPVIRNLERCEEMCTEKERYQRIVQKGVSPYECDIVSGD-VSHEMMVKQYAR 332

  Fly   245 SSADQETPLPHELRNETALHMTMSYLMHEIMDISERQDPQSHMGDWFHFVWDRTRSIRKEITQQE 309
            |:||||.|||||||:|..::.|..||:|.::|  :..|.....|.|::|:|:|||::|||:||..
 Worm   333 SAADQERPLPHELRSEKIMNQTTCYLLHNVLD--DFPDSADQRGAWYNFLWNRTRALRKEVTQLS 395

  Fly   310 LCSLGAVKLVEQCARFHIHCAARLVDADPSVFDSKINAENLTKCLQTLKYMYHDLRIKGVPCPKE 374
            |....|:.|||:|.|.||.....|.|.....||..:|.|.|.||||||:::|.|...:|:.|..|
 Worm   396 LSDTLALNLVERCTRLHILFGYVLCDLGVEQFDPAMNNETLGKCLQTLRHLYEDFEKRGISCENE 460

  Fly   375 AEFRGYIVLLNLADANFLWDIGQLPAELQSCPEVRQAIQFYLALQDTNFVRFFQLLADKDTSYLS 439
            .|||.|.|:|::.|.|.|..:....:|::....||.|:|...|.:|.|:.|||:|| ....|||.
 Worm   461 PEFRSYDVMLHMNDTNVLAQVLAYRSEVRQSQPVRLALQLATAFRDNNYFRFFRLL-QTQASYLQ 524

  Fly   440 ACILVNYFTRLRVLGLHRLIQAYRSPRKDEVSSL---------PLSYIAELLSFASEQEAADFVQ 495
            .|:            .|:|....|| ....:.|:         ||..:..:|.|.:.::....:.
 Worm   525 CCV------------AHKLFAVTRS-NAIRIMSISYGIGNIPYPLDKLQRILGFDNTEDLTVMLN 576

  Fly   496 HYGLQINEAGRVVLSRMHTVETEYKL-------PRQYELVEVKRVKSVGEVVSGEPL-----PPR 548
            .|.|:| |...|:|::    :..|.|       |.|:  ::.|:...:.:||.|..|     ...
 Worm   577 IYELEI-EGSDVILAK----DARYTLNNVVPLKPNQW--IDEKKNGKLSQVVYGPGLFQFIASRC 634

  Fly   549 DL--YLNHRPHNSFDDYGMLKSIAWTAKDQLAGMQQEEMQPQMPSQPPAVSKHSDTLFKVPMQPD 611
            |:  ..|||  |.:.:..:|:.|       |:|                    ||    :|::.:
 Worm   635 DVSNSFNHR--NEYTNDKILEMI-------LSG--------------------SD----IPIRNN 666

  Fly   612 GTAAGFGVFAAAAVPPASSIDGFSFVLPKSRAQEFQEQAPATQQRRAQ-------EEAKHQALQV 669
            .::|.|.. :|.::|..:|::.    ..|...:..:....||:::..|       ::..|.....
 Worm   667 TSSASFAQ-SAGSLPMQASMEN----REKMEVERLKRLELATREKLIQKLMTGVIDQVIHGIANE 726

  Fly   670 AIAAAKKREAELMAIHEAKVAEAERVR--QQKLRERQEQQR--------RQQQELEEQRQR---- 720
            ....||....:::||..|:..:.|:||  .:|..:|.||::        :.::|:.|...|    
 Worm   727 ETMKAKIVRKQMLAIENARKLKEEQVRLENEKKLKRIEQEKNIAKELVLKVEKEISENALRMIID 791

  Fly   721 -EQEKLQLEKERQLKLE---QLFFVQQQEREAHKQTRTLELYQEIFQDTLAEICQSEFMSHSRAC 781
             |..:.:.|:||::..|   :.:.|..:..:.|.::..:|:..|  ::|::|..:   :...|..
 Worm   792 DEIRRERRERERKMAHEIVGKFWRVVLKSVDNHVKSICIEMVNE--KETISEGLE---IFRERVS 851

  Fly   782 RSYESMLDSITRDLVERQMEQSIYELGVMRVCIRRW----------RKYRRTQQEKDTL------ 830
            |.:.....:..||.|:.:....:..:.::|.|:.||          :||..|..:|..:      
 Worm   852 RQWLLQFWNRWRDWVQMKKAAKLKRIEMIRRCVPRWESEEISLNLVKKYGPTNTQKSPICPILNR 916

  Fly   831 -FNQLP-LSFGAENPEGVVN----------------KRSMEDSLR--------------LSRRYR 863
             .|.:. :.|.......:||                ||..|:..:              :..|::
 Worm   917 PSNHIQVIMFKRRRQHRIVNDMFQKWKSYTKKRKALKRIAEEKQKRENEFFSRFNKCALIETRFK 981

  Fly   864 LGEPCDYGKL 873
            ...|.|:.|:
 Worm   982 FDAPDDWMKI 991

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
xmasNP_001356948.1 RRM_XMAS2 12..82 CDD:240903 14/49 (29%)
SAC3_GANP 200..503 CDD:335312 115/311 (37%)
DUF5401 <638..>827 CDD:340095 43/223 (19%)
F20D12.2NP_501328.1 SAC3_GANP 291..582 CDD:367477 114/307 (37%)
SPFH_like <687..788 CDD:388510 19/104 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 202 1.000 Domainoid score I1750
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I2304
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593971at2759
OrthoFinder 1 1.000 - - FOG0003569
OrthoInspector 1 1.000 - - oto20027
orthoMCL 1 0.900 - - OOG6_103177
Panther 1 1.100 - - LDO PTHR12436
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1280
SonicParanoid 1 1.000 - - X2919
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.090

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