DRSC/TRiP Functional Genomics Resources

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Protein Alignment xmas and sac3d1

DIOPT Version :10

Sequence 1:NP_001356948.1 Gene:xmas / 44271 FlyBaseID:FBgn0286809 Length:2079 Species:Drosophila melanogaster
Sequence 2:XP_002937549.2 Gene:sac3d1 / 100489268 XenbaseID:XB-GENE-990220 Length:374 Species:Xenopus tropicalis


Alignment Length:386 Identity:110/386 - (28%)
Similarity:182/386 - (47%) Gaps:39/386 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 SGATQGHCADMCPEKERVLREFQRQVAYYELQPG--------SDELICHE--RALKQYSRSSADQ 249
            |.|..|.|.||||.|||..||.|..:.::|...|        ....:|.:  :.:|:|||.:|.:
 Frog     5 STAPVGLCPDMCPRKERQERERQGLLHHFETTDGQRARRGRRGKASMCADPAKTVKEYSRPAAGK 69

  Fly   250 ETPLPHELRNETALHMTMSYLMHEIMDISERQDPQSHMGDWFHFVWDRTRSIRKEITQQEL-CSL 313
            |...|:::|....|..|:.||:.::.|.....| ..::.:.:.||:||.|::|:::|.|.: ..|
 Frog    70 ELSSPYDIRPPAVLLKTVRYLLMKVWDSVNEMD-SVNLSEAYCFVFDRLRAVRQDMTVQRVRGQL 133

  Fly   314 GAVKLVEQCARFHIHCAARLVDADP-SVFDSKINAENLTKCLQTLKYMYHDLRIKGVPCPKEAEF 377
            |||.|.|...  .:.||..||...| ..:|..::|..:.:....|...|.:    .|..|:||||
 Frog   134 GAVVLEESLG--FLLCAPYLVRHLPVESYDEVLHATQVRESFAELMECYKE----DVRHPREAEF 192

  Fly   378 RGYIVLLNLADANFLWDIGQLPAELQSCPEVRQAIQFYLALQDTNFVRFFQLLADKDTSYLSACI 442
            :..::|.:|.:.:.:....:|...:...|:||.|:....|..:.|:||.|:||...|.  |.:|.
 Frog   193 QALLLLYDLGNLDTMNRALKLHHRIGDAPQVRLAMDVNRAYLECNWVRLFRLLHRLDC--LQSCA 255

  Fly   443 LVNYFTRLRVLGLHRLIQAYRSPRKDEVSSLPLSYIAELLSFASEQEAADFVQHYGLQINEAGRV 507
            ...:.|..|...|..||.||.|..    ...||..:|.|::..|::..|:..:..||.:...|::
 Frog   256 FYRHLTTCRDKNLRMLIHAYSSKN----CRFPLDLLARLMAVDSQETVAEMCRRRGLSLAPGGQL 316

  Fly   508 VLSRMHTVETEYK--LP----RQYELVE-VKRVKSVGEVVSGE----PLPPRDLYLNHRPH 557
            .:.   .:::.:|  :|    |:..||| .||.::...|:.||    ||......|.|..|
 Frog   317 AVV---FLKSSFKDVVPEIHGREILLVERKKREQTWAGVMMGEEETMPLAHSPEELQHEWH 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
xmasNP_001356948.1 RRM_XMAS2 12..82 CDD:409890
SAC3_GANP 205..503 CDD:460911 88/309 (28%)
sac3d1XP_002937549.2 SAC3_GANP 15..310 CDD:460911 88/307 (29%)
Blue background indicates that the domain is not in the aligned region.

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