DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut2 and VPS73

DIOPT Version :9

Sequence 1:NP_524732.1 Gene:sut2 / 44269 FlyBaseID:FBgn0028562 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_011411.3 Gene:VPS73 / 852774 SGDID:S000003072 Length:486 Species:Saccharomyces cerevisiae


Alignment Length:503 Identity:141/503 - (28%)
Similarity:232/503 - (46%) Gaps:63/503 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVMHVTPPKVNGW--TPLLMLICLTVTLGTTIPVGYFFGVLNAPAEIIKKWCQDILANEYDTIVT 65
            ::.:|:.|:.|..  |..|....:..::| :|..||....||||.:::.       .:|:|..:.
Yeast    10 LLSNVSMPRQNKHKITKALCYAIIVASIG-SIQFGYHLSELNAPQQVLS-------CSEFDIPME 66

  Fly    66 AGQLDILWTS-----------------IVSIYLIGGICGSCFSAVLCDKYGRKGCLVISSVLFVV 113
            ....|..|..                 :.|::.||||.||.|:..|.:.||||...:|:..|.:|
Yeast    67 GYPYDRTWLGKRGYKQCIPLNDEQIGIVTSVFCIGGILGSYFATSLANIYGRKFSSLINCTLNIV 131

  Fly   114 -SGILFTWCRAAKSLEMLMTGRFLGGIASALIFTAQPMYLLESAPSELSGSVGVFTCIGVTGGIL 177
             |.|:|.    :.|...|:.||.|.||:...:....|:::.|.|||...|.:|..|.|.:..|:|
Yeast   132 GSLIIFN----SNSYRGLIIGRILVGISCGSLIVIIPLFIKEVAPSGWEGLLGSMTQICIRLGVL 192

  Fly   178 LAQVATLSHLLGSERLWPYALSFYSLLVMASLVLLWWF--PESPRWLYLHKRDSAASEKALLRLR 240
            |.|...|. |..|.| |.:.| |.|.|: |.|....||  .|||:||..|.|.:.| :.:|.:||
Yeast   193 LTQGIALP-LTDSYR-WRWIL-FGSFLI-AVLNFFMWFIVDESPKWLLAHGRVTDA-KLSLCKLR 252

  Fly   241 GRNTEEEVHQELLEMKATLEAKSS-SEVSSLCSVLRNSELWLPL-----------LLVCSFQATQ 293
            | .|.:|..||:.:.:..:|:... .|.::..|:..::.||..|           :.|..|  .|
Yeast   253 G-VTFDEAAQEIQDWQLQIESGDPLIEPTTTNSISGSNSLWKYLRDRTNVKSRHVITVLLF--GQ 314

  Fly   294 QLSGINAIFFYSLSILTNAGFSDGAATWLNLGIGSFNLCTSLLGPLLIRRFPRRPLMMISCSMCA 358
            |..|||:|..|...|::.  .....|..:|..|...|:..::|..|||...||:||:|.|..:.:
Yeast   315 QFCGINSIVLYGTKIISQ--LYPQHAIRINFFISMVNVLVTILVSLLIHSLPRKPLLMTSTVLVS 377

  Fly   359 LALLAMSLGLFFLERSESTVLTYFCAAFILTFILGFQLGLGPIAYFIGSELLEDSPRPVAMSMGS 423
            :....|.:.   :..::..:|..|  :||...:  |.:||.|:.:.|..|:.:.....:|...|:
Yeast   378 VTAFIMGIA---MNHNKMNLLIVF--SFIYMGV--FTMGLNPLPFIIMREVSKPQDMVLAQRYGT 435

  Fly   424 LFSWIGNFLVGMCFPLLQSVWSSFAFIPCMCVCIYCLLLTWRYLPETR 471
            :.:|:|.|::...||::..|.|.:.||....:........|:.:|||:
Yeast   436 ICNWVGTFIIAYTFPIIHDVLSGYVFIIFAIIACSISAFIWKKVPETK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut2NP_524732.1 Sugar_tr 23..473 CDD:278511 136/481 (28%)
MFS 76..466 CDD:119392 121/404 (30%)
VPS73NP_011411.3 MFS_GLUT_Class1_2_like 31..484 CDD:340915 136/482 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342644
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0569
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000120
OrthoInspector 1 1.000 - - mtm9155
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23503
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16872
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.870

Return to query results.
Submit another query.