DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut2 and AT3G19940

DIOPT Version :9

Sequence 1:NP_524732.1 Gene:sut2 / 44269 FlyBaseID:FBgn0028562 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_188628.1 Gene:AT3G19940 / 821532 AraportID:AT3G19940 Length:514 Species:Arabidopsis thaliana


Alignment Length:486 Identity:125/486 - (25%)
Similarity:233/486 - (47%) Gaps:53/486 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GWTPLLMLICLTVTLGTTIPVGYFFGV---LNAPAEIIKKWCQDILAN----EYDTIVTA--GQL 69
            |.|..:::.|:...:|..: .||..|:   :.:..|.:.|:...:.:.    ::||....  .|:
plant    20 GVTAFVIMTCIVAAMGGLL-FGYDLGISGGVTSMEEFLTKFFPQVESQMKKAKHDTAYCKFDNQM 83

  Fly    70 DILWTSIVSIYLIGGICGSCFSAVLCDKYGRKGCLVISSVLFVVSGILFTWCRAAKSLEMLMTGR 134
            ..|:||  |:|| ..:..|..::|:..|:|||..:.|..:.|:: |.||.  ..|.::.||:.||
plant    84 LQLFTS--SLYL-AALVASFMASVITRKHGRKVSMFIGGLAFLI-GALFN--AFAVNVSMLIIGR 142

  Fly   135 FLGGIASALIFTAQPMYLLESAPSELSGSVGVFTCIGVTGGILLAQVATLSHLLGSERLWPYALS 199
            .|.|:.......:.|:||.|.||:::.|::.:...:.:|.|||:|.:........::..|..:|.
plant   143 LLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMAQHGWRVSLG 207

  Fly   200 FYS----LLVMASLVLLWWFPESPRWLYLHKRDSAASEKALLRLRGRNTEEEVHQELLEMKATLE 260
            ..:    ::|:.|.:|    |::|..: |.:..:..:::.|.::||.:..:...|:|::     .
plant   208 LAAVPAVVMVIGSFIL----PDTPNSM-LERGKNEEAKQMLKKIRGADNVDHEFQDLID-----A 262

  Fly   261 AKSSSEVSSLCSVLRNSELWLPLLLVCS-FQATQQLSGINAIFFYSLSILTNAGFSDGAATWLNL 324
            .:::.:|.:....:..|: :.|.|:.|| ....||::|||.|.||:..:....||.|.||....:
plant   263 VEAAKKVENPWKNIMESK-YRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDDAALMSAV 326

  Fly   325 GIGSFNLCTSLLGPLLIRRFPRRPLMM---ISCSMCALALLAMSLGLFFLERSESTVLTYFCA-- 384
            ..|..|:.::.:....:.|:.||.|.:   |...:|.| |:...:|..| ..|.:..||...|  
plant   327 ITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQL-LVGSFIGARF-GTSGTGTLTPATADW 389

  Fly   385 --AFILTFILGFQLGLGPIAYFIGSELLEDSPRP----VAMSMGSLFSW-IGNFLVGMCFPLLQS 442
              |||..::.||....||:.:.:.||:.....||    :.:|:...|:: ||.|.:.|...:...
plant   390 ILAFICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFG 454

  Fly   443 VWSSFA-FIPCMCVCIYCLLLTWRYLPETRG 472
            ::..|| .:..|.|.||.|      ||||:|
plant   455 LFYFFASMVAIMTVFIYFL------LPETKG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut2NP_524732.1 Sugar_tr 23..473 CDD:278511 123/477 (26%)
MFS 76..466 CDD:119392 105/407 (26%)
AT3G19940NP_188628.1 Sugar_tr 29..489 CDD:278511 123/477 (26%)
MFS 79..475 CDD:119392 109/420 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.