DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut2 and PMT1

DIOPT Version :9

Sequence 1:NP_524732.1 Gene:sut2 / 44269 FlyBaseID:FBgn0028562 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_179209.1 Gene:PMT1 / 816109 AraportID:AT2G16120 Length:511 Species:Arabidopsis thaliana


Alignment Length:526 Identity:134/526 - (25%)
Similarity:222/526 - (42%) Gaps:73/526 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VVVMHVTPPKVNGWTPLLMLICLTVTLGTTIPVGYFFGVLNAPAEIIKKWCQDILANEYDTIVTA 66
            ||:....||:.|  .......|..:...|:|.:||..||::..:..||.          |..::.
plant    10 VVIAESEPPRGN--RSRYAFACAILASMTSIILGYDIGVMSGASIFIKD----------DLKLSD 62

  Fly    67 GQLDILWTSIVSIYLIGGICGSCFSAVLCDKYGRKGCLVISSVLFVVSGILFTWCRAAKSLEMLM 131
            .||:|| ..|::||   .:.||..:....|..||:..:|::...|....:|..:   |.:...:|
plant    63 VQLEIL-MGILNIY---SLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGF---ATNYPFIM 120

  Fly   132 TGRFLGGIASALIFTAQPMYLLESAPSELSGSVGVFTCIGVTGGILLAQVAT-----LSHLLGSE 191
            .|||:.||.........|:|..|.||:...|.:..|..|.:..||||..|:.     |...||  
plant   121 VGRFVAGIGVGYAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYFFSKLPEHLG-- 183

  Fly   192 RLWPYALS-------FYSLLVMASLVLLWWFPESPRWLYLHKRDSAASEKALLRLRGRNTEEEVH 249
              |.:.|.       |.::.|:|       .|||||||.|..|...|. |.|.:.  .||:||..
plant   184 --WRFMLGVGAVPSVFLAIGVLA-------MPESPRWLVLQGRLGDAF-KVLDKT--SNTKEEAI 236

  Fly   250 QELLEMKATLEAKSSSEVSSLCSVLRNSE-----LWLPL-----------LLVC-SFQATQQLSG 297
            ..|.::|..:..  ..:::....|:.|.:     :|..|           |:.| .....||.||
plant   237 SRLDDIKRAVGI--PDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFAQQASG 299

  Fly   298 INAIFFYSLSILTNAGF-SDGAATWLNLGIGSFNLCTSLLGPLLIRRFPRRPLMMISCSMCALAL 361
            |:|:..||.:|.:.||. |........:.:|.......::|..::.||.||.|::.|.....|:|
plant   300 IDAVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSL 364

  Fly   362 LAMSLGLFFLERSESTVLTY---FCAAFILTFILGFQLGLGPIAYFIGSELLEDSPRPVAMSMGS 423
            .|:...|..:.|:....|.:   .....::||:..|.:|.||:.:...||:.....|....|:|.
plant   365 TALGTSLTVINRNPGQTLKWAIGLAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGV 429

  Fly   424 LFSWIGNFLVGMCFPLLQ---SVWSSFAFIPCMCVCIYCLLLTWRYLPETRGREPKDVKLLMSQG 485
            :.:.:.:.::||.|..|.   ::..:|.....:....:....|  :||||||...::::.|....
plant   430 MLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFT--FLPETRGIPLEEMETLFGSY 492

  Fly   486 LSSKLN 491
            .::|.|
plant   493 TANKKN 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut2NP_524732.1 Sugar_tr 23..473 CDD:278511 125/485 (26%)
MFS 76..466 CDD:119392 106/425 (25%)
PMT1NP_179209.1 Sugar_tr 29..489 CDD:278511 126/494 (26%)
MFS 31..473 CDD:119392 119/476 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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