DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut2 and ght4

DIOPT Version :9

Sequence 1:NP_524732.1 Gene:sut2 / 44269 FlyBaseID:FBgn0028562 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_595064.1 Gene:ght4 / 2539710 PomBaseID:SPBC1683.08 Length:557 Species:Schizosaccharomyces pombe


Alignment Length:507 Identity:107/507 - (21%)
Similarity:190/507 - (37%) Gaps:92/507 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLMLICLTVTLGTTIPVGYFFGVLNAPAEIIKKWCQDILANEYDTIV-----TAGQLDILWTSIV 77
            |::.|.:...||.. ..|...|:|.      .:..|...|:.|:.|.     :|.:..:|..::.
pombe     9 LVVFISMAGWLGGA-DTGSISGILG------MRDFQSRFADRYNPITNSYSYSAWRQALLTGTVN 66

  Fly    78 SIYLIGGICGSCFSAVLCDKYG---RKGCLVISSVLFVVSGILFTWCRAAKSLEMLMTGRFLGGI 139
            :..|.|.:..|.|:..:..||.   ..||.:|..:|.|.         |..|...:|.|:...|:
pombe    67 AGCLFGAMLSSPFTEAIGKKYSIAFFSGCYIIGQILLVT---------AVPSWVQIMVGKLFTGL 122

  Fly   140 ASALIFTAQPMYLLESAPSELSGS-VGVFTCIGVTGGILLAQVATLSHLLGSERLWPYALSFYSL 203
            ....:....|.|..|.||.::.|: |..:......|.::.|.:...:|.|.....|..:.....|
pombe   123 TIGALSVLSPGYQSEVAPPQIRGAVVSTYQLFQTCGTLIAACINMGTHKLRKTASWRTSFGINIL 187

  Fly   204 LVMASLVLLWWFPESPRWLYLHKRDSAASEKALLRLRGRNTEEEVHQELLEMKATLEAKSSSEVS 268
            ..:..:|.:.:.|||||:|....||..|     ||:..:..|.:...|:::.... ..||..|:.
pombe   188 WGIFLMVGVLFLPESPRYLIYKGRDEEA-----LRIMCQTAELDPESEIIQTNFN-TIKSDIEME 246

  Fly   269 SLCSVLRNSEL------------WLPLLLVCSFQATQQLSGINAIFFYSLSILTNAGFSDGAATW 321
            ......|..|:            :|.:||       ::|.|.|..|:|:..:....|.:|   .:
pombe   247 MAGGKARWPEVFGKEVRYRTVLGFLTMLL-------RELIGNNYYFYYATQVFKGTGMTD---IF 301

  Fly   322 LNLGI-GSFNLCTSLLGPLLIRRFPRR-PLMMISC--SMCALALLAMSLGLFFL----------- 371
            |...| |:.|..|:......|....|| ||:..:.  |:|           ||:           
pombe   302 LPAVILGAINFGTTFGALYTIDNLGRRNPLIFGAAFQSIC-----------FFIYAAVGDRKLIY 355

  Fly   372 ------ERSESTVLTYFCAAFILTFILGFQLGLGPIAYFIGSELLEDSPRPVAMSMGSLFSWIGN 430
                  .|:.:.::.:.|     .|:..:....||:.:.|..|......|....::.:..:|:||
pombe   356 KNGTSDHRAGAVMIVFSC-----LFLFSYCCSWGPMGWVIVGETFPIRYRSKCAAVATSGNWLGN 415

  Fly   431 FLVGMCFPLL-QSVWSSFAFIPCMCVCIYCLLLTWRYLPETRGREPKDVKLL 481
            |:|....|.: .|:.....:| ..|:.:......:....||:|...::|..|
pombe   416 FMVSFFTPFISNSIGFKLGYI-YACINMTSAFQIFLMAKETKGLTLEEVNEL 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut2NP_524732.1 Sugar_tr 23..473 CDD:278511 102/492 (21%)
MFS 76..466 CDD:119392 89/427 (21%)
ght4NP_595064.1 Sugar_tr 9..467 CDD:278511 107/507 (21%)
MFS 10..440 CDD:119392 100/478 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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