DRSC/TRiP Functional Genomics Resources

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Protein Alignment sut2 and hmit-1.2

DIOPT Version :9

Sequence 1:NP_524732.1 Gene:sut2 / 44269 FlyBaseID:FBgn0028562 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_507624.1 Gene:hmit-1.2 / 180206 WormBaseID:WBGene00013074 Length:613 Species:Caenorhabditis elegans


Alignment Length:585 Identity:126/585 - (21%)
Similarity:226/585 - (38%) Gaps:185/585 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GYFFGVLNAPAEIIKKWCQDILANEYDT-IVTAGQLDI-----------LWTSIVSIYLIGGIC- 86
            |:.||                    ||| :|:|..|.:           :|..:: :.:..|:. 
 Worm    37 GFLFG--------------------YDTSVVSAAMLYVPEAPGLKPMGTVWKEVI-VSITPGMAA 80

  Fly    87 -GSCFSAVLCDKYGRKGCLVISSVLFVVSGILFTWCRAAKSLEMLMTGR-FLG---GIASALIFT 146
             |:.||....|:||||..::.|:::||...::   |..|.:..:::.|| |||   |.||.::  
 Worm    81 VGAWFSGAGSDRYGRKPIIIGSTLIFVCGAVI---CAVAWTKIVMLIGRIFLGVGIGFASMVV-- 140

  Fly   147 AQPMYLLESAPSELSGSVGVFTCIGVTGGILLAQVATLSHLLGSERLW-PYALSFYSLLVMASLV 210
              |:||.|::|:.:.|::.....:.::.|.::|.:     :.|....| ||.:.:..:...|.:.
 Worm   141 --PVYLGEASPTHVRGTLVSAFAMMISFGQVVANI-----MGGVFSYWEPYTIGWRLMFAFAGIP 198

  Fly   211 LLWWF------PESPRWLYLHKRDSAASEKALLRLRGRNTEEEVHQELLEMKATL--------EA 261
            .|..|      ||:|||||.:.....| |:.|.::.|.|| |.:..||.|:|...        |.
 Worm   199 ALIQFVCFIFLPETPRWLYENGHTEQA-EQVLEKIYGGNT-EWIEYELAEIKTYAEERQKQMEEE 261

  Fly   262 KSSSEVSSLCSVLRNSELWLPLLLVCSFQATQQLSGINAIFFYSLSILTNAGFSD-GAATWLNLG 325
            |.|..|  :..:|:...:.....:....||.|||:|||.|.:|:..|:.:||..: ....|::: 
 Worm   262 KKSGPV--IWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSAGIENYHTIIWISV- 323

  Fly   326 IGSFNLCTSLLGP----LLIRRFPRRPLMMISCSMCALALLAMSLGLFFL----------ERS-- 374
              ..::| :|:||    ..|.:..||.|.:.||:...::|:.  :|:.||          :||  
 Worm   324 --ILSIC-NLIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVL--IGVSFLLVGNDSAPNFDRSAY 383

  Fly   375 ----------------------------------ESTVLTYFC---------------------- 383
                                              :|...|.||                      
 Worm   384 LLAGNYQSNGEAESCLMLSNCDSCVTSEHCGFCEDSETRTGFCLPVDHNDVTLYSSTGLCTNGLD 448

  Fly   384 -------------------------------AAFILTFILGFQLGLGPIAYFIGSELLEDSPRPV 417
                                           ..::|||..||.    .:.:.:.||......|..
 Worm   449 KSNSSFPNATSYVWQKHHCTTSYTILPIVMMGVYLLTFSCGFT----SLPWVLNSEFYPMWARST 509

  Fly   418 AMSMGSLFSWIGNFLVGMCF-PLLQSVWSSFAFIPCMCVCIYCLLLTWRYLPETRGREPKDVKLL 481
            .:|:.:|.:|:.|.::.:.: .|..::....||.......|...:..:..:|||.|....:|::|
 Worm   510 CVSISTLSNWVFNLIIALTYLSLTHAITKYGAFWLYAIFTIIAFIFIYFLVPETTGYSIDEVEML 574

  Fly   482  481
             Worm   575  574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut2NP_524732.1 Sugar_tr 23..473 CDD:278511 123/575 (21%)
MFS 76..466 CDD:119392 110/515 (21%)
hmit-1.2NP_507624.1 MFS 32..562 CDD:421695 120/571 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158103
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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