DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut2 and hmit-1.1

DIOPT Version :9

Sequence 1:NP_524732.1 Gene:sut2 / 44269 FlyBaseID:FBgn0028562 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:585 Identity:119/585 - (20%)
Similarity:221/585 - (37%) Gaps:155/585 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TPLLMLICLTVTLGTTIPVGYFFGVLNAPAEIIKKWCQDILANEYDT-IVTAGQL---------- 69
            ||.|.|....:...:.|. |:.||                    ||| :|:|..|          
 Worm    18 TPKLGLFVYILAAASVIG-GFLFG--------------------YDTSVVSAAMLYMPDAPGLKP 61

  Fly    70 -DILWTSI-VSIYLIGGICGSCFSAVLCDKYGRKGCLVISSVLFVVSGILFTWCRAAKSLEMLMT 132
             |.:|..: |||.......||..|....|..||:..::.:|.:|.:..::   |.|:.:..||:.
 Worm    62 MDTVWQEVLVSISPGMAAVGSLMSGTSSDYIGRRKVILGASAIFTIGALV---CAASVNKIMLLV 123

  Fly   133 GRFLGGIASALIFTAQPMYLLESAPSELSGSVGVFTCIGVTGGILLAQV--ATLSHLLGSERLWP 195
            ||.|.|||........|:||.|:||:.:.|.:.....:.::.|.::|.:  ...|::......|.
 Worm   124 GRVLLGIAIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITGGAFSYIDPYNVGWR 188

  Fly   196 YALSFYSLLVMASLVLLWWFPESPRWLYLHKRDSAASEKALLRLRGRNTEEEVHQELLEMKATLE 260
            ...:|.::..:...|...:.||:|||||.:..::...|  :|.......:|.|..|:.|:.|..|
 Worm   189 LMFAFAAVPSIIQFVCFMFLPETPRWLYENGFETETRE--VLEKVYNGDKEWVEYEMAEIIAFNE 251

  Fly   261 --AKSSSEVSS----LCSVLRNSELWLPLLLVCSFQATQQLSGINAIFFYSLSILTNAGFSDGAA 319
              ||.:.:..:    :..:|:...:.....:....||.|||:|||.|.:|:..|:.::|.|:...
 Worm   252 DQAKENEKAHASGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSSGISNNHT 316

  Fly   320 T-WLNLGIGSFNLCTSLLGPL----LIRRFPRRPLMMISCSMCALALLAMSLGLFFLERSESTVL 379
            | |:::   ..:|| :.:||.    ||.:..||.:.:.||.:..|:|:.:.:....:....:..|
 Worm   317 TIWISV---LLSLC-NFIGPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFIGVAFLLVNHDSAATL 377

  Fly   380 ----------------------------------------------------------------- 379
                                                                             
 Worm   378 PANQYGSNFNSSYPDAKGCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSSTGSCT 442

  Fly   380 -------------TYF------------CAAFILTFILGFQLGLGPIAYFIGSELLEDSPRPVAM 419
                         .|:            |..::|||..||.    .:.:.:.||......|...:
 Worm   443 NSNGSIANNFKWEKYYCDTKYTLLPIIACGVYLLTFSSGFT----SLPWVLNSEFYPMWARSTCV 503

  Fly   420 SMGSLFSWIGNFLVGMCFPLLQSV---WSSFAFIPCMCVCIYCLLLTWRYLPETRGREPKDVKLL 481
            ::.:..:|:.|.::.:.:..|..|   :.:|.....:.|..:..:|.  .:|||:|...::|::|
 Worm   504 AISTTSNWVFNLIIALTYLSLTQVIGKYGAFWLYAGLTVIAFIFILF--LVPETKGYSIEEVEML 566

  Fly   482  481
             Worm   567  566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut2NP_524732.1 Sugar_tr 23..473 CDD:278511 112/568 (20%)
MFS 76..466 CDD:119392 97/496 (20%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 109/558 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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