DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut3 and SNF3

DIOPT Version :9

Sequence 1:NP_524731.1 Gene:sut3 / 44268 FlyBaseID:FBgn0028561 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_010087.1 Gene:SNF3 / 851333 SGDID:S000002353 Length:884 Species:Saccharomyces cerevisiae


Alignment Length:496 Identity:113/496 - (22%)
Similarity:219/496 - (44%) Gaps:74/496 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVLIC--VCITVGTVIPVGYAFGVMNAPSA--FIRSWIMESVLERYSSRLGDSQMTIIMSTVVS 71
            :::.||  |.:.||..: .||..|::|:.::  :::|.:..:         .||.....||.:||
Yeast    94 MMMSICVGVFVAVGGFL-FGYDTGLINSITSMNYVKSHVAPN---------HDSFTAQQMSILVS 148

  Fly    72 IFLIGGMLGAPFAPIFSARLGRRGILTLSGLLLLVSCICQLFCRMANSIE-------MLLLGRLI 129
            ...:|...||..||..|...||:..:..|.:.:.         .:.||::       :|::||:|
Yeast   149 FLSLGTFFGALTAPFISDSYGRKPTIIFSTIFIF---------SIGNSLQVGAGGITLLIVGRVI 204

  Fly   130 GGLAAALIYATQPMYLVELAPAELSGSVGVFTCIGLTGGIVLGQVF-----------SFDFLLGT 183
            .|:....|.|..|:|..|.....|.|::.......:|.|:::....           |:...:|.
Yeast   205 SGIGIGAISAVVPLYQAEATHKSLRGAIISTYQWAITWGLLVSSAVSQGTHARNDASSYRIPIGL 269

  Fly   184 EKLWPYALSGSAIFVLIGLAPIFWFPESPRFLMSQGRREKARVTLMRLR----RDEGRVNAEMAE 244
            :.:|       :.|:.||:   |:.|||||:.:.:.:.::|..:|..||    .|.|.:. |:.|
Yeast   270 QYVW-------SSFLAIGM---FFLPESPRYYVLKDKLDEAAKSLSFLRGVPVHDSGLLE-ELVE 323

  Fly   245 FEVSSTDE---GQVTMKQVLCNSKLK----LPLFIVCSFHFVQQMSGISAIWFYSIEIFTQSGFT 302
            .:.:...|   |.........:||.:    |.:|...:....||.|||:.|::|.:..|.::|.:
Yeast   324 IKATYDYEASFGSSNFIDCFISSKSRPKQTLRMFTGIALQAFQQFSGINFIFYYGVNFFNKTGVS 388

  Fly   303 AAVAMWLNFALGLLNFISALMGPWLMRSFNRRLMMTISCLCSAIF-LVLLVVGLELMSTIHEFSF 366
            .:..  ::|....:|.:..:.|.:.:..|.||.::.:..:...|. .::.:||..|.:.  ..:.
Yeast   389 NSYL--VSFITYAVNVVFNVPGLFFVEFFGRRKVLVVGGVIMTIANFIVAIVGCSLKTV--AAAK 449

  Fly   367 TCIAFLSLYIITFNMGLGPTPYFIGSEIFETASRPSAMALGSFFNWLANFVLNMIFPTL------ 425
            ..|||:.|:|..|:...|...:.|.:|::....|....|:.:..|||.||:..:|.|.:      
Yeast   450 VMIAFICLFIAAFSATWGGVVWVISAELYPLGVRSKCTAICAAANWLVNFICALITPYIVDTGSH 514

  Fly   426 NSATGPFVFLLCVVFCAYGFLLTYRYLPETRNRDAKDVAQL 466
            .|:.|..:|.:.....|.|.::.|..:.||:....:::.:|
Yeast   515 TSSLGAKIFFIWGSLNAMGVIVVYLTVYETKGLTLEEIDEL 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut3NP_524731.1 Sugar_tr 28..466 CDD:278511 107/475 (23%)
MFS 66..451 CDD:119392 98/420 (23%)
SNF3NP_010087.1 MFS_HXT 99..556 CDD:340914 112/491 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342629
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13429
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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