DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sut3 and MSS1

DIOPT Version :9

Sequence 1:	NP_524731.1	Gene:	sut3 / 44268	FlyBaseID:	FBgn0028561	Length:	476	Species:	Drosophila melanogaster
Sequence 2:	NP_198006.1	Gene:	MSS1 / 832703	AraportID:	AT5G26340	Length:	526	Species:	Arabidopsis thaliana

Alignment Length:	542	Identity:	119/542 - (21%)
Similarity:	223/542 - (41%)	Gaps:	119/542 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 TCLLVLICVCITVGTVIPVGYAFGVMNAPSAFIRSWIMESVLERYSSRLGDSQMTIIMSTVV--- 70
            |.::::.|:....|.:: .||..||....::      |...||::        ..::...||
plant    20 TPIVIISCIMAATGGLM-FGYDVGVSGGVTS------MPDFLEKF--------FPVVYRKVVAGA 69

  Fly    71 -------------------SIFLIGGMLGAPFAPIFSAR-LGRRGILTLSGLLLLVSCICQLFCR 115
                               |::|.|  |.|.|...::.| ||||..:.::|:..::.....   .
plant    70 DKDSNYCKYDNQGLQLFTSSLYLAG--LTATFFASYTTRTLGRRLTMLIAGVFFIIGVALN---A 129

  Fly   116 MANSIEMLLLGRLIGGLAAALIYATQPMYLVELAPAELSGSVGVFTCIGLTGGIVLGQVFSFDFL 180
            .|..:.||:.||::.|..........|::|.|:||..:.|.:.:...:.:|.||:...:.::
plant   130 GAQDLAMLIAGRILLGCGVGFANQAVPLFLSEIAPTRIRGGLNILFQLNVTIGILFANLVNY--- 191

  Fly   181 LGTEKL---WPYALSGSAIFVLIGLAPI---------FWFPESPRFLMSQGRREKARVTLMRLRR 233
             ||.|:   |.:.||       :|||.|         ....|:|..|:.:||.::.:..|.|:|
plant   192 -GTAKIKGGWGWRLS-------LGLAGIPALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIR- 247

  Fly   234 DEGRVNAEMAEFEVSSTDEGQVTMKQV------LCNSKLKLPLFIVCSFHFVQQMSGISAIWFYS 292
              |..|.|.   |.:...|.....|:|      |...:.:..|.|..:....||.:||:||.||:
plant   248 --GTDNVEP---EFADLLEASRLAKEVKHPFRNLLQRRNRPQLVIAVALQIFQQCTGINAIMFYA 307

  Fly   293 IEIFTQSGFTAAVAMWLNFALGLLNFISALMGPWLMRSFNRRLMMT---ISCLCSAIFLVLLVVG 354
            ..:|:..||.:..:::.....|.:|.:|.|:..:.:....||:::.   :....|.: ::.:::|
plant   308 PVLFSTLGFGSDASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQV-VIAIILG 371

  Fly   355 LELMSTIHE----FSFTCIAFLSLYIITFNMGLGPTPYFIGSEIFETASRPSAMALGSFFNWLAN 415
            :::..|...    |:...:..:..|:..|....||..:.|.||.|...:|.:..::....|.|..
plant   372 VKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFT 436

  Fly   416 FVLNMIFPTL--NSATGPFVF-----LLCVVFCAYGFLLTYRYLPETRNRDAKDV---------- 463
            |::...|.::  :...|.|:|     |:..||..:       .||||:|...:::
plant   437 FIIAQAFLSMLCHFKFGIFIFFSAWVLIMSVFVMF-------LLPETKNIPIEEMTERVWKKHWF 494

  Fly   464 -AQLME--------NGFKSKIK 476
             |:.|:        ||.||..|
plant   495 WARFMDDHNDHEFVNGEKSNGK 516

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sut3	NP_524731.1	Sugar_tr	28..466	CDD:278511	110/503 (22%)
sut3	NP_524731.1	MFS	66..451	CDD:119392	97/439 (22%)
MSS1	NP_198006.1	MFS_STP	29..475	CDD:340919	106/490 (22%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D430696at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920