DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut3 and AT5G17010

DIOPT Version :9

Sequence 1:NP_524731.1 Gene:sut3 / 44268 FlyBaseID:FBgn0028561 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001318578.1 Gene:AT5G17010 / 831564 AraportID:AT5G17010 Length:503 Species:Arabidopsis thaliana


Alignment Length:492 Identity:124/492 - (25%)
Similarity:207/492 - (42%) Gaps:87/492 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VGTVIP----------VGYAFGV-------MNAPSAFIRSWIMESVLERYSSRLGDSQMTIIMST 68
            |..::|          .||..|.       :.:||....||...|              ::.:..
plant    45 VAAILPFLFPALGGLLYGYEIGATSCATISLQSPSLSGISWYNLS--------------SVDVGL 95

  Fly    69 VVSIFLIGGMLGAPFAPIFSARLGRRGILTLSGLLLLVSCICQLFCRMANSIEMLLLGRLIGGLA 133
            |.|..|.|.:.|:..|...:..:|||..|.|:.||.||..   |...:|.:..:|::||:|.|::
plant    96 VTSGSLYGALFGSIVAFTIADVIGRRKELILAALLYLVGA---LVTALAPTYSVLIIGRVIYGVS 157

  Fly   134 AALIYATQPMYLVELAPAELSGSV----GVFTCIGLTGGIVLGQVFSFDFLLGTEKLWPYALSGS 194
            ..|.....|||:.|.||:.:.|.:    ..|..:|:.||..:|.:     .:.....|.|..:.|
plant   158 VGLAMHAAPMYIAETAPSPIRGQLVSLKEFFIVLGMVGGYGIGSL-----TVNVHSGWRYMYATS 217

  Fly   195 A-IFVLIGLAPIFWFPESPRFLM---SQGR------REKARVTLMRLRR----DEG--RVNAEMA 243
            . :.|::|:. ::|.|.|||:|:   .||:      ||.|..:|..||.    |..  :||..:|
plant   218 VPLAVIMGIG-MWWLPASPRWLLLRVIQGKGNVENQREAAIKSLCCLRGPAFVDSAAEQVNEILA 281

  Fly   244 EFEVSSTDEGQVTMKQVLCNSKLKLPLFIVCSFHFVQQMSGISAIWFYSIEIFTQSGFTAA-VAM 307
            |......|: :||..::.....|| .|.|.......||::|..::.:|:..|...:||:|| .|.
plant   282 ELTFVGEDK-EVTFGELFQGKCLK-ALIIGGGLVLFQQITGQPSVLYYAPSILQTAGFSAAGDAT 344

  Fly   308 WLNFALGLLNFISALMGPWLMRSFNRRLMMTISCLCSAIFLVL-----LVVGLELMSTIHEF--- 364
            .::..||||..|...:...::....||.            |:|     :||.|.|:.:.:.|   
plant   345 RVSILLGLLKLIMTGVAVVVIDRLGRRP------------LLLGGVGGMVVSLFLLGSYYLFFSA 397

  Fly   365 -SFTCIAFLSLYIITFNMGLGPTPYFIGSEIFETASRPSAMALGSFFNWLANFVLNMIFPTLNSA 428
             ....:..|.||:..:.:..||..:.:.||||....|...::|....|:.||.::...|..|...
plant   398 SPVVAVVALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNFGANALVTFAFSPLKEL 462

  Fly   429 TGPFVFLLC--VVFCAYGFLLTYRYLPETRNRDAKDV 463
            .|..: |.|  .|.|....:..:..:|||:....:::
plant   463 LGAGI-LFCGFGVICVLSLVFIFFIVPETKGLTLEEI 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut3NP_524731.1 Sugar_tr 28..466 CDD:278511 122/475 (26%)
MFS 66..451 CDD:119392 111/416 (27%)
AT5G17010NP_001318578.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.