DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut3 and PMT6

DIOPT Version :9

Sequence 1:NP_524731.1 Gene:sut3 / 44268 FlyBaseID:FBgn0028561 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_195385.1 Gene:PMT6 / 829820 AraportID:AT4G36670 Length:493 Species:Arabidopsis thaliana


Alignment Length:505 Identity:122/505 - (24%)
Similarity:205/505 - (40%) Gaps:85/505 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CITVGTVIPV--GYAFGVMNAPSAFIRSWIMESVLERYSSRLGDSQMTIIMSTVVSIFLIGGMLG 80
            |..|.:::.:  ||..|||:....||..          ..:..|.|:.::...:....|:|.:|.
plant    20 CAIVASIVSIIFGYDTGVMSGAMVFIEE----------DLKTNDVQIEVLTGILNLCALVGSLLA 74

  Fly    81 APFAPIFSARLGRRGILTLSGLLLLVSCICQLFCRMANSIEMLLLGRLIGGLAAALIYATQPMYL 145
            ...:.|    :|||..:.|:.:|.::..|   ......:..:||.||...||.........|:|.
plant    75 GRTSDI----IGRRYTIVLASILFMLGSI---LMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYS 132

  Fly   146 VELAPAELSGSVGVFTCIGLTGGIVLGQVFSFDFLLGTEKL-----WPYALSGSAIFVLIGLAPI 205
            .|:|.|...|.:.....:.::.||:||.:.::.|    .||     |...|..:|:..|:....|
plant   133 AEIATASHRGLLASLPHLCISIGILLGYIVNYFF----SKLPMHIGWRLMLGIAAVPSLVLAFGI 193

  Fly   206 FWFPESPRFLMSQGRREKARVTL---------MRLRRDEGRVNA--------EMAEFEVSSTDEG 253
            ...|||||:|:.|||.::.:..|         ..||..:.:..|        ::.:.|...| .|
plant   194 LKMPESPRWLIMQGRLKEGKEILELVSNSPEEAELRFQDIKAAAGIDPKCVDDVVKMEGKKT-HG 257

  Fly   254 QVTMKQVLC--NSKLKLPLFIVCSFHFVQQMSGISAIWFYSIEIFTQSGFTAAVAMWL-NFALGL 315
            :...|:::.  ...::..|......||.|..|||.|:..|...||.::|.|....::| ...:|:
plant   258 EGVWKELILRPTPAVRRVLLTALGIHFFQHASGIEAVLLYGPRIFKKAGITTKDKLFLVTIGVGI 322

  Fly   316 LNFISALMGPWLMRSFNRRLMMTISCLCSAIFLVLLVVGLEL-------------MSTIHEFSFT 367
            :..........|:....||.::..|.....|.|.:|..||.:             :|.:..:|| 
plant   323 MKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAGGKLAWALVLSIVAAYSF- 386

  Fly   368 CIAFLSLYIITFNMGLGPTPYFIGSEIFETASRPSAMALGSFFNWLANFVLNMIFPTLNSAT--- 429
             :||       |::||||..:...||:|....|....:||...|.:.|..::|.|.:|.||.   
plant   387 -VAF-------FSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTG 443

  Fly   430 GPFVFLLCVVFCAYGFLLTYRYLPETRNRDAKDVAQLM---------ENG 470
            |.|.....|...|:.|.  :..||||:.:..:::..|.         |||
plant   444 GAFFMFAGVAAVAWNFF--FFLLPETKGKSLEEIEALFQRDGDKVRGENG 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut3NP_524731.1 Sugar_tr 28..466 CDD:278511 116/478 (24%)
MFS 66..451 CDD:119392 103/425 (24%)
PMT6NP_195385.1 Sugar_tr 20..479 CDD:278511 118/491 (24%)
MFS 22..463 CDD:119392 113/473 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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