DRSC/TRiP Functional Genomics Resources

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Protein Alignment sut3 and hmit-1.1

DIOPT Version :9

Sequence 1:NP_524731.1 Gene:sut3 / 44268 FlyBaseID:FBgn0028561 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:520 Identity:110/520 - (21%)
Similarity:192/520 - (36%) Gaps:127/520 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 TIIMSTVVSIFLIGGMLGAPFAPIFSARLGRRG-ILTLSGLLLLVSCICQLFCRMANSIEMLLLG 126
            |:....:|||......:|:..:...|..:|||. ||..|.:..:.:.:|   ....|.| |||:|
 Worm    64 TVWQEVLVSISPGMAAVGSLMSGTSSDYIGRRKVILGASAIFTIGALVC---AASVNKI-MLLVG 124

  Fly   127 RLIGGLAAALIYATQPMYLVELAPAELSGS-VGVFTCIGLTGGIV---LGQVFSFDFLLGTEKLW 187
            |::.|:|........|:||.|.||..:.|. |..|..:...|.:|   .|..||:        :.
 Worm   125 RVLLGIAIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITGGAFSY--------ID 181

  Fly   188 PYALSGSAIFVLIGLAPIFWF------PESPRFLMSQGRREKARVTLMRL-RRDEGRVNAEMAEF 245
            ||.:....:|....:..|..|      ||:||:|...|...:.|..|.:: ..|:..|..||||.
 Worm   182 PYNVGWRLMFAFAAVPSIIQFVCFMFLPETPRWLYENGFETETREVLEKVYNGDKEWVEYEMAEI 246

  Fly   246 EVSSTDEGQVTMK---------QVLCNSKLKLPLFIVCSFHFVQQMSGISAIWFYSIEIFTQSGF 301
            ...:.|:.:...|         ::|....:....||.......||::||:.|.:|:.:|...||.
 Worm   247 IAFNEDQAKENEKAHASGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSSGI 311

  Fly   302 T-AAVAMWLNFALGLLNFISALMGPWLMRSFNRRLMMTISCLCSAIFLVLLVVGLELMSTIHEFS 365
            : ....:|::..|.|.|||...:...|:....||::...|  |..:.|.|:.:|:..:...|:.:
 Worm   312 SNNHTTIWISVLLSLCNFIGPFVPMSLIEKVGRRIIFLFS--CGLVVLSLVFIGVAFLLVNHDSA 374

  Fly   366 FT-------------------CIAF---------------------------------------- 371
            .|                   |:|:                                        
 Worm   375 ATLPANQYGSNFNSSYPDAKGCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSSTG 439

  Fly   372 -------------------------------LSLYIITFNMGLGPTPYFIGSEIFETASRPSAMA 405
                                           ..:|::||:.|....|:.:.||.:...:|.:.:|
 Worm   440 SCTNSNGSIANNFKWEKYYCDTKYTLLPIIACGVYLLTFSSGFTSLPWVLNSEFYPMWARSTCVA 504

  Fly   406 LGSFFNWLANFVLNMIFPTLNSATGPF-VFLLCVVFCAYGFLLTYRYLPETRNRDAKDVAQLMEN 469
            :.:..||:.|.::.:.:.:|....|.: .|.|........|:.....:|||:....::|..|..|
 Worm   505 ISTTSNWVFNLIIALTYLSLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEVEMLFMN 569

  Fly   470  469
             Worm   570  569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut3NP_524731.1 Sugar_tr 28..466 CDD:278511 108/515 (21%)
MFS 66..451 CDD:119392 103/497 (21%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 104/503 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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