DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Inx3 and che-7

DIOPT Version :9

Sequence 1:NP_001263050.1 Gene:Inx3 / 44266 FlyBaseID:FBgn0265274 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001317771.1 Gene:che-7 / 184979 WormBaseID:WBGene00000488 Length:563 Species:Caenorhabditis elegans


Alignment Length:420 Identity:107/420 - (25%)
Similarity:169/420 - (40%) Gaps:112/420 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVFGMVSAVSGFIKIRYLLDKAVIDNMVFRCHYRITTAILFTCCIIVTANNLIGDPISCINDGA 65
            |.:..|.||:|   .:.|..|    |:.|.|..|..|::.|....::|:.....|.|:.|    .
 Worm    43 MVLQNMFSALS---FLHYRKD----DDFVDRLSYFYTSSFLIMMAVLVSFKQFGGRPLEC----W 96

  Fly    66 IPMH-------VINTFCWITYTYTIPGQQHRQIGTDVAGPGLGNEYGQEKRYHSYYQWVPFVLFF 123
            :|..       ....:||...||.:|..|  .|..|::        .:|.|..||||||||.|..
 Worm    97 VPAQFTASWEAYTEMYCWAQNTYWVPIDQ--DIPVDIS--------EREYRQISYYQWVPFFLLL 151

  Fly   124 QGLMFYVPHWVWKNMEDGK-------IRMITDGLRGMVSVPDDYR-------------------- 161
            |..::|:|..:|:.|.|..       ::|.|:    ..::..|||                    
 Worm   152 QAFLYYIPCLMWRLMSDKSGIRLNDIVQMATE----KENIEPDYRIRTIESLSRHIESALRYQHT 212

  Fly   162 -----RDRQDRILKYFVNSLNTHNGYSFAYFFCELLNFI-NVIVNIFMVDKFL-GGAFMSYGTDV 219
                 :....|:.|.|  ::..:..|....:....:.:: |::.|:.:|:||| ...:..||..|
 Worm   213 ATSRTQYTLHRVFKCF--NMRYYESYVTGMYLATKIMYVGNILTNLVLVNKFLETDEYSIYGLGV 275

  Fly   220 LKFSNMDQDKRFD-PMIEI--FPRLTKCTFHKFGPSGSVQKHDTLCVLALNILNEKIYIFLWFWF 281
            |:      |..|. ..||.  |||:|.|.| :....|:.|:|...|||.:||.||||:|.:|.||
 Worm   276 LR------DLLFGRTWIESGNFPRVTLCDF-EVRVLGNNQRHSVQCVLVINIFNEKIFILIWLWF 333

  Fly   282 IILATISGVAVLYSLVVIMMPTTRETIIKRS------------YRSAQRKEI------------- 321
            .:|...|.:.:||...:.|....|...:.|.            :|..:||::             
 Worm   334 TLLFVASTLDMLYWFSISMFHRDRFRFVLRHLELTSDPDKPELFRKEKRKQVEHFLRTYLKVDGV 398

  Fly   322 ---------AGLVRRLEIGDFLILHFLSQN 342
                     ||::...||.|.|...:|||:
 Worm   399 LVLRMIALHAGVMFCTEITDALWKRYLSQH 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Inx3NP_001263050.1 Innexin 26..356 CDD:279248 100/395 (25%)
che-7NP_001317771.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 1 0.900 - - E1_2BWHM
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 1 0.900 - - OOG6_104894
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.880

Return to query results.
Submit another query.