DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sara and rush

DIOPT Version :10

Sequence 1:NP_524729.2 Gene:Sara / 44263 FlyBaseID:FBgn0026369 Length:1343 Species:Drosophila melanogaster
Sequence 2:NP_569923.2 Gene:rush / 31105 FlyBaseID:FBgn0025381 Length:316 Species:Drosophila melanogaster


Alignment Length:262 Identity:64/262 - (24%)
Similarity:90/262 - (34%) Gaps:96/262 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   522 GKVP-----PIWVPDNMAGQCMQCQQ-KFTMIKRRHHCRACGKVLCSVCCSQRFRLEFATEPESR 580
            ||.|     .:||||..|..||.|:: :||.|:||||||.||.|:|:.|.:::|.|...:....|
  Fly   138 GKKPVENHAAVWVPDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFLLPQQSTKALR 202

  Fly   581 VCVQCYMILS---ERQANGLNSESAPGSALPPTPIRSPNPNNPMEYCSTIPPHRQVANSPGAPPP 642
            ||..||..|.   ....:|.:|.:|.|:|       |.|.                         
  Fly   203 VCDACYERLKHVPSSLGSGEDSAAATGAA-------SGNK------------------------- 235

  Fly   643 SVIVPVGVLKKTDGSSSNSSSSDGQKGQRKRKSVMFSDGIAPGSELASTMEQQWGESKHSRRGLS 707
                    |..|.|.|||...||             .:..:||.|                    
  Fly   236 --------LNTTAGDSSNDEDSD-------------EETASPGGE-------------------- 259

  Fly   708 RSGSGAGQKPPTPATEEPPRSIDTSSTLGLVAQLFRGSIPPSAAAATLSATETSAGRSSSQSQAQ 772
                          :.:.||....:|.|..|......:.|.||...:|.|.:.:....||.:...
  Fly   260 --------------SHDEPRFYGDNSVLSAVEDSSTITSPSSATTGSLEAPQVTPSVQSSPAAVA 310

  Fly   773 TS 774
            |:
  Fly   311 TT 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SaraNP_524729.2 FYVE_endofin 522..589 CDD:277268 32/72 (44%)
SARA 614..650 CDD:463271 2/35 (6%)
DUF3480 959..1321 CDD:463419
rushNP_569923.2 PH_Phafin2-like 7..129 CDD:269927
FYVE_PKHF 148..208 CDD:277257 27/59 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.