DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sara and aka-1

DIOPT Version :9

Sequence 1:NP_524729.2 Gene:Sara / 44263 FlyBaseID:FBgn0026369 Length:1343 Species:Drosophila melanogaster
Sequence 2:NP_495565.2 Gene:aka-1 / 174216 WormBaseID:WBGene00000101 Length:1284 Species:Caenorhabditis elegans


Alignment Length:1510 Identity:332/1510 - (21%)
Similarity:583/1510 - (38%) Gaps:415/1510 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLVDIDQVLDNLELSIAADEQLSRNAAAAAAAGANPGRFLGDGASASISGVGAGAGVSGAAGVTP 66
            ::.|:|.:||.:|      ..|.:...:..:....|...:|                ....|:..
 Worm     3 EVPDMDDLLDEME------SDLVKKCCSVQSKPLLPPTSIG----------------MQPRGIKH 45

  Fly    67 TPASGKSFVGVSQVFNSLDDYRENVKSLQVD-AQLPSYDWQTEA-----EHEDDIHKFSEQASKN 125
            .||. ::.|.||:...|.|...:...::.:| :|||: .:||::     ..|.:|.|.:|.::: 
 Worm    46 NPAP-RTVVTVSKFVISEDMNEQMEGNINIDTSQLPN-TFQTKSSFPPNSDERNIGKENEVSAR- 107

  Fly   126 NGQTIVSSSESL-TTSSCSTFSSGPSPVSN--GSHSEELATP-PEDEKTSEVQVE---PKEQ--- 180
              |.|....:|: ..|..:.|......::.  ...||..:.| ||.|:.|||:.:   |:.|   
 Worm   108 --QEIAHKLKSVHNYSDATNFDPSKKVITQKFSQESEPESEPEPEPEEVSEVEEDTLVPETQIIS 170

  Fly   181 -------DQQP------------------------------------------------------ 184
                   |.:|                                                      
 Worm   171 NLNATARDTEPTATISKPNLDLDTEMEDMLAYLNDESVDKSSLKDKPAREEGGRDSIEESANESA 235

  Fly   185 --------------EQVKHEDQHQDQAVPPPTQSKQTVEEL-AVGLSSI--SITASGTESQSLLP 232
                          |.:.|...|.|.||....::..:|.:: |:.|.|.  |:.:...::.:.|.
 Worm   236 LYQFADRFSELVISEALNHRKMHYDPAVKEFYEANDSVPDVFAMSLDSTHSSLNSFNADNHNYLS 300

  Fly   233 EEVTASSVLGQVLEELSEESSPSREP-----ETEMTNGIDVPLANLPASVAEVPVPKEMEQPVQT 292
            |...:|.  .:.::.::||:..|.||     |||         .||.....:|...:..|..||.
 Worm   301 EPENSSK--KERMQSVAEENEASEEPTQSSSETE---------KNLQNEKIDVEFIENSEAIVQN 354

  Fly   293 EEEDVELPQEQHPRRSQPLTFCSTMDEISDTELDSMLQEMDAD---DNQADDQQMPDDEKSCSAS 354
            |.|||  |:.               :..|.|.|:::...:::|   :|.::...:.:.....|.:
 Worm   355 ESEDV--PES---------------NSTSGTVLENIEDHLESDVVIENGSESSFVNEKMNEASTA 402

  Fly   355 PVTEEESV------RILSDEQETTSNDQMNVDNFSQASTVEFADLKQPESTPVTAMGEDVASSFS 413
            .:..|:||      .:.:::|||.|.:  ..|:.:..::.||.|  :...:..:...|:|..:..
 Worm   403 HLVAEQSVVDDSEIHLETEDQETLSPE--TADSSTNKNSDEFPD--EGSQSEASVNNEEVLENVE 463

  Fly   414 STESDSLSGRKLDGEVEVDREHEDASLATDALETQEQRPQRPQTLNLNGCQAESSTPSQDENPEI 478
            ..|.:..       .|:...|:.|:|:..:..|..|.||:...::                    
 Worm   464 HVEDECT-------VVDAVNENTDSSIEENDEENTENRPRFDSSI-------------------- 501

  Fly   479 QQETLQPTEVREGAAGVGVIPGEDDEES--PIYEAVGYSDPHANLGKVPPIWVPDNMAGQCMQCQ 541
                          |.:.|:...|.:||  |..|. ..::....|||..|.|:||:....||.|.
 Worm   502 --------------ATIHVLHESDSDESATPRRER-RLTESELQLGKTSPYWIPDSECPNCMLCN 551

  Fly   542 QKFTMIKRRHHCRACGKVLCSVCCSQRFRLEFATEPES-----RVCVQCYMILSERQANGLNSES 601
            .:||:|.|||||||||:|||..||:::..||:..|...     |||..|..:|:..:.:..:.:.
 Worm   552 TRFTIITRRHHCRACGRVLCGSCCNEKAFLEYLQEEGKKLQAVRVCKPCSAMLARIETHEQDEQR 616

  Fly   602 APGSALPPTPIRSPNPNNPMEYCSTIPPHRQVANSPGAPPPSVIVPVGVLK--------KTDGSS 658
            ...|      |.|.|..:..|..|:|            |..|..:|.||||        :.||:|
 Worm   617 RRES------IASENGLSGDETISSI------------PAASTSIPRGVLKTKPTVHVNEEDGAS 663

  Fly   659 SNSS--SSDGQKGQRKRKSVMFSDGIAPGSELASTMEQQWGESKHSRRGLSRSGSGAGQKPPTPA 721
            ::|.  |:.|......|:||||.||:.||:                                 ||
 Worm   664 TSSQAHSTSGNVSDSSRRSVMFRDGVRPGA---------------------------------PA 695

  Fly   722 TEEPPRSIDTSSTLGLVAQLFRGSIPPSAAAATLSATETSAGRSSSQSQAQTSPRRKAESSRNRK 786
            .|..|..                             ..::|.:...:|:.:||..|:....|.. 
 Worm   696 DEGNPEE-----------------------------ERSTALKPKKKSRKRTSVVRRIAELRME- 730

  Fly   787 LPPNGDAQGCYLPPEENGLPPICISSKEGGEVDYKVVRNDGSLLDRLQN-ETLKFIIKNNFFVLV 850
                 |...|.||.|  |:..:.|...   :.::....:..::|:.|.| ..:..::|.|....|
 Worm   731 -----DELACALPKE--GITKLLIVKP---DCEHPKFEDASTVLETLCNFSVVTVVLKKNLNCTV 785

  Fly   851 KIVNMSCCMNRWVLNFTTSGLHHMGSDELII----------LLEIKQPKQEEYVKGEVAIPKDLF 905
            :|.|.......|.:  :|.|...:|.|||:.          .::.::|:.:| ....|.:|..:.
 Worm   786 QIFNNPNFGLVWAV--STQGFAQIGLDELMFSWTLNDQEKQKVDAEEPELDE-KSALVVLPLPVL 847

  Fly   906 QHLYEIYVEA-EHARSGTHEL--------AFTSPRNANFLGSREHGGFIFIRPTYQC-LQGVIVP 960
            ..:..||.:: ||..:|..::        :.|.|.    ....:|  .:|.|||.|. |:.:.:|
 Worm   848 HRISLIYTQSTEHEYAGVRKVENRLMRVHSVTDPT----YPLTKH--IMFFRPTVQVGLKNMRIP 906

  Fly   961 DNPYLVGVLIHRHEVPWAKVLPLRLILRLGAQYRYYPCPLISVRGRESVYG-EIAQTIINFLVDF 1024
            .||:|:...:|..|:.||..||.||:.:||.::..:|.|.::..||||.|. :::.|::....||
 Worm   907 TNPFLIACFLHDDELNWATALPNRLLYKLGEKFNVFPTPFVNSIGRESTYSTDVSGTVLKVFTDF 971

  Fly  1025 RNYSYSLPAIRGLYIHMEDRQTTVIIPKYRQQDVIKAINNASDHILAFAGNFSKVADGHLVCMQN 1089
            |::||.:..|.|..:.:.:.:|.:.|||...:: :|.:.|.|..::|::.:.....|..|||   
 Worm   972 RSWSYRMRHISGCTVSLTNDKTVIRIPKSAIKE-LKDVLNFSRSMVAWSCDLHCEDDSVLVC--- 1032

  Fly  1090 INDDRSEMYSYSTQ--AINIQGQPRKITGASFFVLNEALKSSSGLSGKCSIVEDGLMVQIMPAKM 1152
               :.::...||||  |.|| || |:.|.|||.:|:...|.|   |.:.::||||:.|::...::
 Worm  1033 ---EETDPGLYSTQVFAKNI-GQ-RESTSASFVILDGGSKVS---SLQVNVVEDGVAVRLQSERL 1089

  Fly  1153 EEVRQALRNQNDIDIVCGPIDATDDQSEIVSI----KWVDNNRDINVGVKSPID-----DQPMDG 1208
            |.:..|:.:.||      .::::.|....|..    .|:..:.|..  .||.||     ::...|
 Worm  1090 ETILNAINDGND------AVESSKDMEFRVEFVEDGNWICTDSDYY--PKSQIDGLYLINKFQYG 1146

  Fly  1209 ISNMRVLKWASFNYSNTNYAIRLSDIYIIKCEDWYATNGGNCE-----EITRIAEQLARSASMAL 1268
            :|..|.|..........:|.||:|.:|.:        ..|..:     :|..:.|..||.....|
 Worm  1147 LSLERALTQVLQVQGINDYGIRMSHVYNL--------GDGRLQPEEEPKIYGMIEIAARECVAML 1203

  Fly  1269 LPLLDLLAAAGINKLGLRATLDQDNVGYEAG------ARGSKLPPLYMNALDNHLIATLHGESSG 1327
            .|.:..|..|||..:.:|..:......|:..      |...|    |..:||..:          
 Worm  1204 EPHIQHLICAGIGSVSIRLFVSPYEFEYDVSKWLGLEAENDK----YKQSLDQLI---------- 1254

  Fly  1328 IQEPIILELIFYILN 1342
               |::..::.|:.|
 Worm  1255 ---PMLYNMVEYVPN 1266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SaraNP_524729.2 FYVE_endofin 522..589 CDD:277268 33/71 (46%)
SARA 614..650 CDD:288292 8/35 (23%)
DUF3480 959..1321 CDD:288806 103/384 (27%)
aka-1NP_495565.2 PTZ00341 <334..>477 CDD:173534 32/170 (19%)
FYVE_endofin 532..604 CDD:277268 33/71 (46%)
DUF3480 905..1257 CDD:371829 104/396 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 112 1.000 Domainoid score I3897
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003142
OrthoInspector 1 1.000 - - oto19192
orthoMCL 1 0.900 - - OOG6_105532
Panther 1 1.100 - - LDO PTHR46319
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2928
SonicParanoid 1 1.000 - - X2534
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.940

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