DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sara and zfyve16

DIOPT Version :9

Sequence 1:NP_524729.2 Gene:Sara / 44263 FlyBaseID:FBgn0026369 Length:1343 Species:Drosophila melanogaster
Sequence 2:XP_012808244.1 Gene:zfyve16 / 100490307 XenbaseID:XB-GENE-985796 Length:1443 Species:Xenopus tropicalis


Alignment Length:1599 Identity:449/1599 - (28%)
Similarity:695/1599 - (43%) Gaps:430/1599 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVDIDQVLDNLELSIAADEQLSRNAAAAAAAGANP-----------------GRFLGDGAS---- 46
            :||:|::||:.|.:.   |.|....::.|:.|:|.                 |:.|.:.:|    
 Frog     9 VVDLDKLLDDFEQNA---EVLENCQSSGASLGSNQCSLYSGNFCHQPEFSALGKQLNEKSSPQQA 70

  Fly    47 --------------------ASISGVGAGAGVSGAAGVTPTPASGKSFVGVSQVFNS-------- 83
                                .:::|:...:.|.|..........|::.|.|..:.:.        
 Frog    71 LCSTDKDVDFQTFCPESCAEKNVTGLDLLSCVDGGGSSDDVLGPGRTSVPVCDLISDTGSLIQKD 135

  Fly    84 -----------LDD---------YRENVKSLQVDAQLPSYDWQT---EAEH-------------- 111
                       |.|         :.||.:|        |..||.   :.||              
 Frog   136 TSSEPEISSTHLSDLELHSDTIIHTENTES--------SISWQVIALDCEHRTWLPINQPNLVVI 192

  Fly   112 --EDDIHKFS-EQA------SKNNGQTIVSSSESLTTSSCSTFSSGPSPVSNGSHSEELATPPE- 166
              :||....| :|.      .:|.....||:::::::|:.||        |:|..|::|  |.| 
 Frog   193 SPKDDGSNISLDQVLACNLDQENRATDSVSNTDTVSSSNTST--------SDGYVSDDL--PYET 247

  Fly   167 -----------DEKTSE---------------VQVEPKEQDQQPE-QVK----------HEDQHQ 194
                       .||.::               ::...|:..|..: :||          ::....
 Frog   248 LTEGQEFLGLKGEKDTQCLPGADYEEAMNGGCIEASCKDVAQSSDVEVKGAVVCRAGRANKKPAS 312

  Fly   195 DQAVPPPTQSKQTVEELAVGLSSISITASGTESQSLLPEEVTASSVLGQVLEELSEESSPSREPE 259
            ||.:  |.............:|.:|..:|.:...|    ::..|...|.:..|:::..:|..|..
 Frog   313 DQGL--PVLGTIIASHCTGDMSDVSTDSSVSVDNS----QMECSVQKGVLSSEINQCITPCTEKN 371

  Fly   260 TEMTN------------------GID---VPLANLPASVAEVPVPKEMEQPVQTEEEDVELPQEQ 303
            |...|                  |:|   |...:||:...||.| :|::...|.:.....||...
 Frog   372 TATQNNGMRAADSISFTVLKDDKGLDVDYVQAGHLPSLAKEVDV-QEIKNLEQKKNTPYHLPTAL 435

  Fly   304 HP------RRSQPLTFC------------------STMDE--ISDTELDSMLQEMDAD-DNQAD- 340
            .|      ::.|.|...                  :.:.|  |||.|||:.|.:.|.| ..|.. 
 Frog   436 APNAMESRKKEQILDIAPVSSSEFKEDFLHDLISSNVLSEAYISDAELDAFLNQEDGDLSTQFTL 500

  Fly   341 DQQMPDDEKSCS-ASPVTEEESVRILSDEQETTSNDQMNVDNFSQASTVEFADLKQPESTPVTAM 404
            ....|..:..|| .||..:|.:..:.:|....|::....|                 .|.|    
 Frog   501 HNDCPPYDFICSNNSPAVDETAGGLGTDSSSFTADCSPAV-----------------SSLP---- 544

  Fly   405 GEDVASSFSSTESDSLSGRKLDGEVEVDREHEDASLATDALETQEQR-PQRPQTLNLNGCQAESS 468
                  |::|.:..|:.|.:  .:|::..|:...:...|...:...: ..||:       |..:|
 Frog   545 ------SYTSKQESSVLGAQ--SQVKITSENSLPAAVKDGDNSSSHKGGARPK-------QLFNS 594

  Fly   469 TPSQDENPEIQQETLQPTEVREGAAGVGVIPGEDDE-----ESPIYEAVGYSDPH---------- 518
            .|..  .|:|.|.||..|:      |.|....|...     .|||  .:..:.||          
 Frog   595 HPKL--LPDISQNTLVNTD------GQGNNKPEQSSADVTPSSPI--GIAEAQPHDLNISSVLGK 649

  Fly   519 -AN-------------------------LGKVPPIWVPDNMAGQCMQCQQKFTMIKRRHHCRACG 557
             ||                         ||:..|.|:||:.|..||.|..|||..||||||||||
 Frog   650 SANTNGSSELNRKEKGCRSENGTSQNPVLGQRQPTWIPDSEAPTCMNCSVKFTFTKRRHHCRACG 714

  Fly   558 KVLCSVCCSQRFRLEFATEPESRVCVQCYMILSERQA-NGLNSESAPGSALPPTPIRSPNPNNPM 621
            ||.|:|||||:::|.: .:.|:||||.|:.::|:.|| ..:.|.:.|          |||||.|.
 Frog   715 KVFCAVCCSQKWKLPY-MDKEARVCVVCFGLVSKVQAFERMMSPTGP----------SPNPNVPS 768

  Fly   622 EYCSTIPP--HRQVANSPGAPPPSVIVPVGVLKKTDGSSSNSSSSDGQKG-QRKRKSVMFSDGIA 683
            ||||||||  ..|.|.:..:|||:|:||..|||:           .|.:| |::.|.|.|:||:.
 Frog   769 EYCSTIPPLVQAQAAGTLNSPPPTVLVPGSVLKQ-----------PGVQGSQKEPKRVWFADGLL 822

  Fly   684 PGSELASTMEQQWGESKHSRRGLSRSGSGAGQKPPTPATEEPPRSIDTSSTLGLVAQLFRGSIPP 748
            |..|:|.|.:.. ...|.|.:.||.........|.|  |:|.|.:::                  
 Frog   823 PNGEVADTTKFS-SFVKRSSQDLSPEACSLPDSPMT--TDEIPNNLN------------------ 866

  Fly   749 SAAAATLSATETSAGRSSSQSQAQTSPRRKAESSRNRKLP----------PNGDAQGC------- 796
                           ....::..:|||   .:|...:.||          |:..:..|       
 Frog   867 ---------------EHEKETGLETSP---VDSCMEKSLPEALSAFKVSSPSDYSMLCGLDKCVS 913

  Fly   797 ----YLPPEENGLPPICISSKEGGE--VDYKVVRNDGSLLDRLQNETLKFIIKNNFFVLVKIVNM 855
                .:|.:|..|||:.::|.|||:  ::......:..||.......:.||:..|..:.||||..
 Frog   914 RDVSLIPDDEERLPPLLLASGEGGDALIENSPTNKEVLLLLEEGLSLVTFILNANLLLNVKIVTY 978

  Fly   856 SC--CMNRWVLNFTTSGLHHMGSDELIILLEIKQPKQEEYVKGEVAIPKDLFQHLYEIYVEAEHA 918
            :.  |   |.  |:|:|||.:|..|:||||..        ::.|..:|||:|:...:||.:|:..
 Frog   979 ASEKC---WF--FSTNGLHGLGQAEIIILLAC--------LENEDILPKDMFRVFIDIYKDAQKG 1030

  Fly   919 R--SGTHELAFTSPRNANFLGSREHGGFIFIRPTYQCLQGVIVPDNPYLVGVLIHRHEVPWAKVL 981
            |  .....:.||.    :||.:::||||:|..||:|.|.|:.:|:.|:|.||:|.:.|||||||.
 Frog  1031 RYVGNLENITFTE----SFLSNKDHGGFLFFAPTFQDLTGLPLPNCPFLCGVIIQKMEVPWAKVF 1091

  Fly   982 PLRLILRLGAQYRYYPCPLISVRGRESVYGEIAQTIINFLVDFRNYSYSLPAIRGLYIHMEDRQT 1046
            |:||:|||||:...|||||:|.|.|:.::|||..||||.|.|.|||.|::|.:.||.|||:..:.
 Frog  1092 PIRLMLRLGAESGAYPCPLMSRRHRKPLFGEIGHTIINLLTDLRNYQYTIPHVDGLLIHMQVGKI 1156

  Fly  1047 TVIIPKYRQQDVIKAINNASDHILAFAGNFSKVADGHLVCMQNINDDRSEMYSYSTQAINIQGQP 1111
            .:.||..|..:::|.|:.:::|:::...:||..||.||||:||.:.      .|.|||.:..|:.
 Frog  1157 CIKIPSRRHNEILKVIHASNEHVISIGASFSLEADSHLVCVQNSDG------IYQTQANSAPGKD 1215

  Fly  1112 RKITGASFFVLNEALKSSSGLSGKCSIVEDGLMVQIMPAKMEEVRQALRNQNDIDIVCGPIDATD 1176
            |::|||||.|.|.|||:|||...|.|||||||||||||..||.:|||||::.|..|.||.||::|
 Frog  1216 REVTGASFVVFNGALKTSSGFLAKSSIVEDGLMVQIMPDMMEALRQALRDKKDFRIPCGKIDSSD 1280

  Fly  1177 DQSEIVSIKWVDNNRDINVGVKSPIDDQPMDGISNMRVLKWASFNYSNTNYAIRLSDIYIIKC-E 1240
            ...| |:|.||:.....|.|:.||||.|.|:||.:.|:.:...|..::..          :|| |
 Frog  1281 STEE-VTICWVETEEKQNKGITSPIDVQSMEGIPSERICQETDFEVNDKT----------VKCTE 1334

  Fly  1241 DWYATNGGNCEEI---TRIAEQLARSASMALLPLLDLLAAAGINKLGLRATLDQDNVGYEAGARG 1302
            .:|..........   ::.|:::|.:.:.||.|.:..|..:|:|::|||.::|.|.|.|.||:||
 Frog  1335 VFYLLRDHEANSAMAHSQFAKEIATACAAALCPHIKTLKNSGMNRIGLRVSMDIDMVEYRAGSRG 1399

  Fly  1303 SKLPPLYMNALDNHLIATLHGESSGIQ-EPIILELIFYI 1340
            ..||.||:|.||..||..:|..:|... .|:::||||::
 Frog  1400 QLLPQLYLNDLDCALIPVIHNRTSDTSILPLVMELIFFL 1438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SaraNP_524729.2 FYVE_endofin 522..589 CDD:277268 37/66 (56%)
SARA 614..650 CDD:288292 22/37 (59%)
DUF3480 959..1321 CDD:288806 160/365 (44%)
zfyve16XP_012808244.1 FYVE_endofin 679..742 CDD:277268 36/63 (57%)
SARA 761..799 CDD:371513 22/37 (59%)
DUF3480 1069..1418 CDD:371829 160/365 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 323 1.000 Domainoid score I1213
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 566 1.000 Inparanoid score I1063
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003142
OrthoInspector 1 1.000 - - otm48138
Panther 1 1.100 - - LDO PTHR46319
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2534
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.060

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