DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF5B and AT1G76820

DIOPT Version :9

Sequence 1:NP_001246599.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster
Sequence 2:NP_565140.5 Gene:AT1G76820 / 844016 AraportID:AT1G76820 Length:1166 Species:Arabidopsis thaliana


Alignment Length:1253 Identity:504/1253 - (40%)
Similarity:702/1253 - (56%) Gaps:205/1253 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GKKE-----------ILTKVEGGSSVDEISDVDSDQLSLNNKQNHALKGNQAGDDDVKAVTKGVK 60
            |:||           :.:.:.|..|..:...:|.|:.|:..::...        ::.|.|..|.|
plant     2 GRKEPSSRGGDDEQPLASSLVGSKSDKKSVQIDDDEYSICLEEPKV--------EENKVVITGKK 58

  Fly    61 KLNVKG-KGKAGKNDDSD--------EEEVVP----------AKGKASKKS-AFELLMDDDEQDE 105
            |...:. ||...:.||.|        ||||||          :|||....| :|.||.|:|.::|
plant    59 KGKKRNKKGTQQQQDDDDDFADKFAVEEEVVPDNAFVGNNKKSKGKKDGGSVSFALLADEDNREE 123

  Fly   106 P-------AAQESQSEKEEKVVV--------SKPQKNEKK---------GKKAKRKGKD----DD 142
            .       :.::..|:|:...|:        |:.:.::.|         .||.|:|.|.    .:
plant   124 AEDNDITFSGRKKSSKKKSSSVLASIGDEESSQSKTSDSKSVELVESARSKKHKKKNKSGRTLQE 188

  Fly   143 DEDLDKVLAELQAEYAGEAAPAATTVVSPEELADEFSKKKKNKKQAKQAAVAENAGEDEASDDEE 207
            |:||||:||||     || .|||....|.||         |::.|.:..|..||.| :   .:||
plant   189 DDDLDKLLAEL-----GE-TPAAGKPASEEE---------KDQAQPEPVAPVENTGXE---GEEE 235

  Fly   208 GGSTVKSAAQKKKEKKERQKREAALAKQKAATEPKPKPVEKPAPEPEPVATEEVQPAAEEEEEKS 272
               ||::||.|||:||:.:::|...|...|||    ..||....:.|...||.:||         
plant   236 ---TVETAAAKKKKKKKEKEKEKKAAAAAAAT----SSVEAKEEKQEESVTEPLQP--------- 284

  Fly   273 SKNKKKGKKDKKAEPEEEKKDAKKKGMSASMVAAMQEQLRKRKEEEERLEREEAERIRLEDEREE 337
               :||..|.|.|    |||..|.       |..:||.|.:|:|.:||.::||.|::|.|:| |.
plant   285 ---RKKDAKGKAA----EKKIPKH-------VREIQEALARRQEAKERKKKEEEEKLRKEEE-ER 334

  Fly   338 ARLEAVRLEAER-KEKKKQREAERKARLKAEGKLLTKKQKEDRARAQALLESLKAQ--GLEIPDP 399
            .|.|.:..:||. |.|:|::|.|:..|.|.||||||.|||.:..:.:|....|.|.  ||.:.|.
plant   335 RRQEELDAQAEEAKRKRKEKEKEKLLRKKLEGKLLTAKQKSEAQKREAFKNQLLAAGGGLPVADD 399

  Fly   400 ND-----KRPTRPGTRIRPNKKKGPKEEA------AEEEAKAAEAEAQSAAAAAAAAAAEKAEEE 453
            :|     |||      |..||||..:::.      .|.|.:..|..|.....:|.....:..|..
plant   400 DDDATSSKRP------IYANKKKSSRQKGNDTSVQVEGEVEPKENHALGEVGSADTEKVDLLESA 458

  Fly   454 RVKESWDATDSEAEPEPEEETSQATNNGKTEAAEEENEDTDDDEDDDDDEDDSDDSD----GDSD 514
            .:.|.                    :.|..:.|:|...    :|||:.|....|:.|    ||.|
plant   459 NLGEK--------------------SGGPADVAQENGV----EEDDEWDAKSWDNVDLKIRGDFD 499

  Fly   515 D---------SREVSVLANDPESRRLRA--------EARILKRQAEAE-----KKRST------- 550
            |         .:|.....:|.|:.:..|        |...:|..:|.|     .||:.       
plant   500 DKEEEAQHVVKKEFKAHYSDHETEKPTAKPAGMSKLETAAVKAISEVEDAATQTKRAKKGKCLAP 564

  Fly   551 --------DELRAGVVCVLGHVDTGKTKILDKLRRTHVQDSEAGGITQQIGATNVPIEAIKEQTK 607
                    ::||:.:.|::||||:||||:||.:|.|:||:.||||||||||||..|.:.|:|:|:
plant   565 NEFIEEGGEKLRSIICCIMGHVDSGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAKNIRERTR 629

  Fly   608 YVKAAAGFEHRLPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIQLLKKKK 672
            .:||.|  :.::||||:|||||||||:|||:|||||||:|||||||.|||:||||||:.||:.:.
plant   630 ELKADA--KLKVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDITHGLQPQTIESLNLLRMRN 692

  Fly   673 CPFIVALNKIDRLYDWKQLARRDVRDVLKEQQSNTQLEFQQRTKDVILQFAEQGLNAALFYENTD 737
            ..||:||||:||||.||......:...:|:|..:...||..|.|.:|.:|.|||||..|:|:|.|
plant   693 TEFIIALNKVDRLYGWKTCKNAPIVKAMKQQNKDVINEFNLRLKKIINEFQEQGLNTELYYKNKD 757

  Fly   738 PKTYISLVPTSAISGEGMGNLLFMIADFCQNMLAKRLMYSEELQATVLEVKALPGLGTTIDAILI 802
            .....|:||||||||||:.:||..:..:.|..:.::|.|.:|:|.||||||.:.|.|||||.:|:
plant   758 MGETFSIVPTSAISGEGVPDLLLWLVQWAQKTMVEKLTYVDEVQCTVLEVKVIEGHGTTIDVVLV 822

  Fly   803 NGKLREGQTMVVAGTDGPIVTQIRSLLMPQPMKELRVKNAYVEYKEVKAAQGVKIAAKDLEKAIA 867
            ||:|.||..:||.|..|||||.||:||.|.||||||||..|:.:||:|||||:||.|:.||.|||
plant   823 NGELHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITAQGLEHAIA 887

  Fly   868 GINLLIAHKPDEVEICTEEVARELKSALSHIKLAQTGVHVQASTLGSLEALLEFLRTS--KIPYS 930
            |.:|.:....|::|...|....:::|.||.|..:..||:||.|||||||||||||:|.  .||.|
plant   888 GTSLHVVGPDDDIEAMKESAMEDMESVLSRIDKSGEGVYVQTSTLGSLEALLEFLKTPAVNIPVS 952

  Fly   931 AIRIGPVVKRDVMKASTMLEHEAQYATILAFDVKIEREAQEMADSLGVKIFQADIIYHLFDKFTA 995
            .|.||||.|:|:|||..|||.:.:||||||||||:..||:|:||.:|||||.|||||.||::|..
plant   953 GIGIGPVHKKDIMKAGVMLEKKKEYATILAFDVKVTTEARELADEMGVKIFCADIIYQLFNQFQV 1017

  Fly   996 YREELKQKKREEFRSVAVFPCKLRILPQFVFNSRDPIVMGVMVENGIVKVGTPICVPSKEFVDIG 1060
            |.|.:|::|::|....|||||.|:|||..|||.||||::||.|.:||:|:|||||||.:||.|||
plant  1018 YIENIKEEKKKESAGEAVFPCVLQILPNCVFNKRDPIILGVKVHDGILKIGTPICVPGREFTDIG 1082

  Fly  1061 IVTSIESNHKQIEFARKGQEICVKIDPIPGESPKMFGRHFEADDMLISKISRQSIDACKDYFRDD 1125
            .:.|||:|||.:::|.||.|:.:||.....|..|||||||:.:|.|:|.|||:|||..|..:..:
plant  1083 RIASIENNHKPVDYAEKGDEVAIKIVASNREEQKMFGRHFDMEDELVSHISRRSIDILKADYMKE 1147

  Fly  1126 LIKADWALMVELKKLFEI 1143
            :....|.|:::||::|:|
plant  1148 MSTEKWKLLLKLKRIFKI 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF5BNP_001246599.1 PRK04004 553..1129 CDD:235195 319/577 (55%)
IF2_eIF5B 557..769 CDD:206674 118/211 (56%)
aeIF5B_II 779..889 CDD:293904 62/109 (57%)
IF-2 890..993 CDD:288813 65/104 (63%)
IF2_aeIF5B_IV 1016..1110 CDD:293911 53/93 (57%)
AT1G76820NP_565140.5 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 246 1.000 Domainoid score I543
eggNOG 1 0.900 - - E1_COG0532
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 818 1.000 Inparanoid score I80
OMA 1 1.010 - - QHG53766
OrthoDB 1 1.010 - - D1124591at2759
OrthoFinder 1 1.000 - - FOG0002309
OrthoInspector 1 1.000 - - otm2596
orthoMCL 1 0.900 - - OOG6_101241
Panther 1 1.100 - - O PTHR43381
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1735
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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