DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF5B and AT2G27700

DIOPT Version :9

Sequence 1:NP_001246599.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster
Sequence 2:NP_001118399.1 Gene:AT2G27700 / 817316 AraportID:AT2G27700 Length:480 Species:Arabidopsis thaliana


Alignment Length:487 Identity:230/487 - (47%)
Similarity:320/487 - (65%) Gaps:24/487 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 DDSREVSVLANDPESRRLRAEARILKRQAEAEKKRSTDELRAGVVCVLGHVDTGKTKILDKLRRT 578
            ||.:::   ..|..|||              .|....|::|:.:.|::||:||||||:||.: ..
plant    12 DDKQQI---VGDEHSRR--------------NKLSEEDKVRSPICCMMGHIDTGKTKLLDYI-TG 58

  Fly   579 HVQDSEAGGITQQIGATNVPIEAIKEQTKYVKAAAGFEHRLPGLLIIDTPGHESFSNLRNRGSSL 643
            :||:.||||.||::|||.:....|.|:|..:|:..  :.::|..|.|||||:|.::|||:||..|
plant    59 NVQEGEAGGTTQKMGATYLSARNILEKTMELKSDT--KLKVPRPLFIDTPGYEFYTNLRSRGLGL 121

  Fly   644 CDIAILVVDIMHGLEPQTIESIQLLKKKKCPFIVALNKIDRLYDWKQLARRDVRDVLKEQQSNTQ 708
            ||.|||||||||||||||||.:.||:.|...||:||||:||||.|:......:.:.:|:|..:..
plant   122 CDFAILVVDIMHGLEPQTIECLNLLRMKNTEFIIALNKVDRLYGWRICENAPILEAMKQQTKDVI 186

  Fly   709 LEFQQRTKDVILQFAEQGLNAALFYENTDPKTYISLVPTSAISGEGMGNLLFMIADFCQ-NMLAK 772
            .||..|..::|.||.|||||:.|:|:|.:.....|:|||.||||||:.:||.::....| .|:.|
plant   187 NEFNMRLNEIINQFKEQGLNSELYYKNKEMGETFSIVPTCAISGEGIPDLLLLLVQLTQKTMVEK 251

  Fly   773 RLMYSEEL-QATVLEVKALPGLGTTIDAILINGKLREGQTMVVAGTDGPIVTQIRSLLMPQPMKE 836
            .:.|.::: |.||||||.:.|.|||||.:|:||:|.||..:||.|..|||||.||:||.|.|:||
plant   252 LITYVDKVQQCTVLEVKVMEGYGTTIDVVLVNGELHEGGQIVVCGLQGPIVTTIRALLTPHPIKE 316

  Fly   837 LRVKNAYVEYKEVKAAQGVKIAAKDLEKAIAGINLLIAHKPDEVEICTEEVARELKSALSHIKLA 901
            |.|...:|.::.:|||:.:.|.|||||..|.|..|.:....|::|...|.|..::.|.||.|..:
plant   317 LHVNGNHVHHEVIKAAECINIIAKDLEHVIVGTALHVVGPDDDIEAIKELVMEDVNSVLSRIDKS 381

  Fly   902 QTGVHVQASTLGSLEALLEFLRTS--KIPYSAIRIGPVVKRDVMKASTMLEHEAQYATILAFDVK 964
            ..||::|||||||||||||||::.  |:|...|.||||.|:|||||..|||.:.::|||||.||:
plant   382 GEGVYIQASTLGSLEALLEFLKSPAVKLPVGGIGIGPVQKKDVMKAGVMLERKKEFATILALDVE 446

  Fly   965 IEREAQEMADSLGVKIFQADIIYHLFDKFTAY 996
            :..||:|:||.:.||||.:||:|||||::.||
plant   447 VTTEARELADEMEVKIFCSDIMYHLFDQYQAY 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF5BNP_001246599.1 PRK04004 553..1129 CDD:235195 222/448 (50%)
IF2_eIF5B 557..769 CDD:206674 102/212 (48%)
aeIF5B_II 779..889 CDD:293904 54/110 (49%)
IF-2 890..993 CDD:288813 60/104 (58%)
IF2_aeIF5B_IV 1016..1110 CDD:293911
AT2G27700NP_001118399.1 GTP_EFTU 35..235 CDD:278438 100/202 (50%)
IF2_eIF5B 37..246 CDD:206674 101/211 (48%)
aeIF5B_II 261..369 CDD:293904 54/107 (50%)
IF-2 373..475 CDD:288813 60/101 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 246 1.000 Domainoid score I543
eggNOG 1 0.900 - - E1_COG0532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53766
OrthoDB 1 1.010 - - D1124591at2759
OrthoFinder 1 1.000 - - FOG0002309
OrthoInspector 1 1.000 - - otm2596
orthoMCL 1 0.900 - - OOG6_101241
Panther 1 1.100 - - O PTHR43381
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.790

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