DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF5B and CG2017

DIOPT Version :9

Sequence 1:NP_001246599.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster
Sequence 2:NP_649603.3 Gene:CG2017 / 40733 FlyBaseID:FBgn0037391 Length:643 Species:Drosophila melanogaster


Alignment Length:510 Identity:93/510 - (18%)
Similarity:170/510 - (33%) Gaps:124/510 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 ARAQALLESLKAQGLEIPDPNDKRPTRPGTRIRPNKKKGPKEEAAEEEAK---------AAEAEA 435
            :..|.::||.    |.:.|||                   :::..|||.:         ::.::.
  Fly    34 SNCQHIMESF----LSLFDPN-------------------QDDGFEEEPELNGNSSGGGSSSSDY 75

  Fly   436 QSAAAAAAAAAAEKAEEERVKESWDATDSEAEPEPE----EETSQATN----------------- 479
            ::.|.|...:.......||....:|.......|||:    |...:..|                 
  Fly    76 ETDANANECSVVSGMPTERGNLIFDFEQGMLPPEPQLGNVEYKLKLVNPSKQRFEHLVTQMKWRL 140

  Fly   480 -NGKTEAAEEENEDTDDDEDDDDDEDDSDDSDGDSDDSREVSVLANDPESRRLRAEARILKRQAE 543
             .|..||..|..            ..|:....|.||.....|:......:..|.|...:|:|:..
  Fly   141 REGNGEAIYEIG------------VSDAGYLQGLSDKDMNASLTTLKQMAHSLGASTSVLRRKTI 193

  Fly   544 AEKKRSTDELRAGV----------VCVLGHVDTGKTKILDKLRR---------------THVQDS 583
            |.::...:.|...:          |.|||..|.||:.:|..|.:               .|:.:.
  Fly   194 AARRAVAEVLVRKIPDDQHNIEVRVAVLGGADAGKSTLLGVLTQDELDNGHGRARLNMFRHMHEI 258

  Fly   584 EAGGITQQIGATNVPIEAIKEQTKY----VKAAAGFEHRLPGLL-IIDTPGHESFSNLRNRGSSL 643
            ::|. |..|....:..:|:.....|    :..|.....|...|: .:|..||..:  :|....:|
  Fly   259 QSGR-TSCISHETLGFDALGNVVNYKYNEMMTAEEISDRSSKLVTFMDLAGHRRY--MRTTVQAL 320

  Fly   644 C----DIAILVVDIMHGLEPQTIESIQLLKKKKCPFIVALNKIDRLYDWKQLARRDVRDVLKEQQ 704
            .    ..|:|||....|....|.|.:.:::....||.|.:.|.|....          |...::.
  Fly   321 SGYSPHYAMLVVSAGSGCNDTTEEHLAIVRALDMPFFVLVTKTDITSP----------DATVQEL 375

  Fly   705 SNTQLEFQQRTKDVILQFAEQGLNAALFYENTDPKTYISLVPTSAISGEGMG---NLLFMIADFC 766
            .|.......|....::...::.::|.   .|...:..:.:...|.::|.|:.   ..|::::...
  Fly   376 CNLLTTIGCRKVPFVVTNTDEAISAG---SNQISENIVPIFCVSNVTGTGLNLVTKFLYVLSPGI 437

  Fly   767 QNMLAKRLMYSEELQATVLEVKALPGLGTTIDAILINGKLREGQTMVVAGTDGPI 821
            .|....|| ..|..:..|.|:..:..:|..:..:|:.|.|.|...|.:    ||:
  Fly   438 SNAEKDRL-EQESCEFQVDEIFRVSDVGPVVGGLLVQGVLTENMAMKI----GPL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF5BNP_001246599.1 PRK04004 553..1129 CDD:235195 59/306 (19%)
IF2_eIF5B 557..769 CDD:206674 44/248 (18%)
aeIF5B_II 779..889 CDD:293904 10/43 (23%)
IF-2 890..993 CDD:288813
IF2_aeIF5B_IV 1016..1110 CDD:293911
CG2017NP_649603.3 GTPBP1 100..635 CDD:227583 79/421 (19%)
GTPBP1_like 217..436 CDD:206728 44/234 (19%)
GTPBP_II 450..536 CDD:293895 10/42 (24%)
GTPBP_III 547..634 CDD:294007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464640
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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