DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF5B and CG33158

DIOPT Version :9

Sequence 1:NP_001246599.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster
Sequence 2:NP_788515.1 Gene:CG33158 / 39834 FlyBaseID:FBgn0053158 Length:1033 Species:Drosophila melanogaster


Alignment Length:625 Identity:141/625 - (22%)
Similarity:234/625 - (37%) Gaps:211/625 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 VCVLGHVDTGKTKILD---------------KLR-RTHVQDSEAGGITQQIGATNVPIEAIKEQT 606
            :|:|.|||.|||.:.|               ||| ..:..|.:..|||.:..:.::..:..:|. 
  Fly    22 ICILAHVDHGKTTLADSLVASNGIISQRMAGKLRYLDNRSDEQERGITMKSSSISLYYQEAEEM- 85

  Fly   607 KYVKAAAGFEHRLPGLLI--IDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIQLLK 669
                  ||    .|..||  ||:|||..||:..:....|||.||:|||::.|:.|||...::.:.
  Fly    86 ------AG----NPDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVVEGVGPQTRACLRQIY 140

  Fly   670 KKKCPFIVALNKIDRLYDWKQLARRD----VRDVLKEQQSNTQLEFQQRTKDVILQFAEQGLNAA 730
            :::...::.|||:|||...||:...|    :..||::..:.....|   ..|::   |::.:...
  Fly   141 EEQLKPVLVLNKLDRLILEKQMDPLDAYFHLCQVLEQVNAVLGSIF---ASDIL---AKEDITKK 199

  Fly   731 LFYENT-----DPKTYISLVPTSAISGEGMGNLL---------FMIADFCQNMLAKRLMYSEELQ 781
            ..||:.     |.:.|.|  |:|       ||::         |.:.||.. |.||||..|.:..
  Fly   200 DNYESALEEVDDSELYFS--PSS-------GNVIFCSAYDGWAFSVRDFAA-MYAKRLEMSRKDL 254

  Fly   782 ATVL---------EVKALPGLGTTIDAILINGKLREGQTMVVAGTDGPIVTQIRSLLMPQPMKEL 837
            ..||         :.:||||           .:.:..:.|.|..    ::..|.||     ...:
  Fly   255 ENVLWGDFYYNSKKKEALPG-----------AQEKAKKPMFVQF----VLENIWSL-----YDII 299

  Fly   838 RVKNAYVEYKEVKAAQGVKIAAKDLE--------KAIAG---------INLLIAHKPDEVEICTE 885
            .::....:...:....|:|:|.:||.        ||:.|         ::::|.|.|...:|..|
  Fly   300 AIRKDKDKLPGIAEKLGLKLATRDLRLTDPKLQIKAVLGQWLPIDKSVLHMVIQHVPPPHKISDE 364

  Fly   886 EVARELKSALSHIKLAQTGVHVQASTL--GSLEALLEFLRTSKIPYSAIRIGPVVKRDVMKASTM 948
            ...|.|..|           :|..|:|  .:||....|  ||....|:..|..|.|...:..:.:
  Fly   365 RAQRLLYPA-----------NVDLSSLPPETLELKESF--TSCDANSSNVIAFVSKMTPVHITHL 416

  Fly   949 LEHEAQYATILAFDVKIEREAQEMADSLGVKIFQADIIYHLFDKFTAYREELKQKKRE-EFRSVA 1012
            .::..:..|        ::|.|:..|.:..:|                 ||.||:..: |...::
  Fly   417 PQNRPKRLT--------DQEVQQRRDEVRRRI-----------------EERKQQSEQAELEKIS 456

  Fly  1013 VFPCKLRILPQFVFNSRDPIVMGVMVENGIVKVGTPICVPSKEFVDIGIVTSIESNHKQ------ 1071
                                       .|:.::.|.:..|.||          ||..::      
  Fly   457 ---------------------------QGVEQLSTQVVGPEKE----------ESKPEEADQNEF 484

  Fly  1072 --IEFAR-------KGQE---ICVKIDP------IPGESP 1093
              |.|||       :|.|   :..|.||      ..||:|
  Fly   485 VFIAFARVFSGTLKRGMELFNLSPKHDPRQPTHRKEGEAP 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF5BNP_001246599.1 PRK04004 553..1129 CDD:235195 141/625 (23%)
IF2_eIF5B 557..769 CDD:206674 67/246 (27%)
aeIF5B_II 779..889 CDD:293904 24/135 (18%)
IF-2 890..993 CDD:288813 19/104 (18%)
IF2_aeIF5B_IV 1016..1110 CDD:293911 19/102 (19%)
CG33158NP_788515.1 PTZ00416 15..1016 CDD:240409 141/625 (23%)
EF2 20..249 CDD:206672 72/253 (28%)
EF2_II 485..572 CDD:293913 12/40 (30%)
EF2_snRNP_III 587..658 CDD:293918
aeEF2_snRNP_like_IV 658..899 CDD:238839
eEF2_snRNP_like_C 896..974 CDD:239763
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464649
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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