DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF5B and mEFTu2

DIOPT Version :9

Sequence 1:NP_001246599.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster
Sequence 2:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster


Alignment Length:486 Identity:101/486 - (20%)
Similarity:167/486 - (34%) Gaps:136/486 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 REVSVLANDPESRRLR-AEARILKRQAEAEKKRSTDELRAGVVCVLGHVDTGKTKILDKLRRTHV 580
            |.:|.....|.:.:.| ...|:|...|:........||....|..:||||.|||.:...:.|...
  Fly    18 RRISQALIGPGASQSRWTGTRLLATSADKNPAPGLRELPHCNVGTIGHVDHGKTTLTAAITRIQS 82

  Fly   581 Q----------------DSEAGGITQQIGATNVPIEAIKEQTKYVKAAAGFEHRLPGLLIIDTPG 629
            |                :.:|.|||  |.|.::         .|......:.|       .|.||
  Fly    83 QKGLAEYLSYDQIDRAPEEKARGIT--INACHI---------GYSTTERTYAH-------TDCPG 129

  Fly   630 HESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIQLLKKKKCP-FIVALNKIDRLYDWKQLAR 693
            |..:......|:|..|.|||||....|..|||.|.:.|.|:.... .||.:||.|          
  Fly   130 HADYIKNMISGASQMDGAILVVAATDGQMPQTREHLLLAKQVGIQRIIVFINKAD---------- 184

  Fly   694 RDVRDVLKEQQSNTQLEFQQRTKDVILQFAEQGLNAALFYENTDPKTYISLVPTSAISGEGMGNL 758
                  |.:|:....:|.:.|  :::..|...|:|:.:                  |.|..:..|
  Fly   185 ------LVDQEVLELVEIEMR--EMLSDFGFDGVNSPV------------------ICGSALLAL 223

  Fly   759 LFMIADFCQNMLAKRLMYSEELQAT---------VLEVK---ALPGLGTTIDAILINGKLREGQT 811
            ....::|....:.|.|...:....|         :|.:.   .:||.||.:...:..|.:.....
  Fly   224 REDKSEFGVPSIEKLLEQCDSYIPTPQRDISSPFILPIDNAFTVPGRGTVVVGTIKRGTIPRNAD 288

  Fly   812 MVVAGTDGPIVTQIRSLLMPQPMKELRVKNAYVEYKEVKAAQGVKIAAKDLEKAIAGIN---LLI 873
            ..:.|.:..:.|.|                           ..::|..|.:.:|.||.|   ||.
  Fly   289 ADLLGFNQNLKTSI---------------------------SDIQIFRKSVPQAQAGENVGALLR 326

  Fly   874 AHKPDEVE----IC---TEEVARELKSALSHIKLAQTGVHVQASTLGSLEALLEFLRTSKIPYSA 931
            ..|...||    :|   :|:::...:.::..:..|:.| .|:......::.|  |.:|..:|   
  Fly   327 GIKISAVERGMLLCATGSEDISNHFEGSMYLLSRAEGG-RVKPMLSKYIQQL--FSQTWNVP--- 385

  Fly   932 IRIGPVVKRDVMKASTML---EHEAQYATIL 959
                  .:.|::.:..||   ||.....|:|
  Fly   386 ------ARIDIVPSEAMLMPGEHGQVRVTLL 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF5BNP_001246599.1 PRK04004 553..1129 CDD:235195 93/449 (21%)
IF2_eIF5B 557..769 CDD:206674 53/228 (23%)
aeIF5B_II 779..889 CDD:293904 23/131 (18%)
IF-2 890..993 CDD:288813 14/73 (19%)
IF2_aeIF5B_IV 1016..1110 CDD:293911
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 94/451 (21%)
EF_Tu 56..249 CDD:206671 55/246 (22%)
EFTU_II 257..343 CDD:293898 21/112 (19%)
mtEFTU_III 347..437 CDD:294005 14/76 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464595
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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