DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF5B and eEF2

DIOPT Version :9

Sequence 1:NP_001246599.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster
Sequence 2:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster


Alignment Length:641 Identity:130/641 - (20%)
Similarity:232/641 - (36%) Gaps:198/641 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   545 EKKRSTDELRAGVVCVLGHVDTGKTKILDKL---------------RRTHV-QDSEAGGITQQIG 593
            :|||:...:     .|:.|||.||:.:.|.|               |.|.. :|.:...||.:..
  Fly    14 DKKRNIRNM-----SVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIKST 73

  Fly   594 ATNVPIEAIKEQTKYVKAAAGFEHRLPGLLI--IDTPGHESFSNLRNRGSSLCDIAILVVDIMHG 656
            |.::..|..::...::......|....|.||  ||:|||..||:.......:.|.|::|||.:.|
  Fly    74 AISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 138

  Fly   657 LEPQTIESI--QLLKKKKCPFIVALNKIDRLYDWKQLARRDVRDVLKEQQSNTQLEFQQRTKDVI 719
            :..|| |::  |.:.::..| |:.:||:||              .|.|.|.:.: |..|..:.::
  Fly   139 VCVQT-ETVLRQAIAERIKP-ILFMNKMDR--------------ALLELQLDAE-ELYQTFQRIV 186

  Fly   720 LQFAEQGLNAALFYENTD--PKTYISLVPT--SAISGEGMGNLLFMIADFCQNMLAKRLMYSEEL 780
                 :.:|..:...|.|  |...:.:.|:  |...|.|:....|.:..|.:       ||||:.
  Fly   187 -----ENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSE-------MYSEKF 239

  Fly   781 QATVLEVKALPGLGTTIDAILINGKLREGQTMVVAGTDGPIVTQIRSLLMPQPMKELRVKNAYVE 845
            :               ||.:.:..:| .|:....|.|.           ..|..||...|.::..
  Fly   240 K---------------IDVVKLMNRL-WGENFFNAKTK-----------KWQKQKEADNKRSFCM 277

  Fly   846 YKEVKAAQGVKIAAKDLEKAIAGINLLIAHKPDEVEICTEEVARELKSALSHIKLAQTG----VH 906
            |              .|:......:.::.:|.:|:....|::...||    |....:.|    ..
  Fly   278 Y--------------ILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLK----HEDKDKDGKALLKT 324

  Fly   907 VQASTLGSLEALLEFLRTSKIPYSAIRI-GPVVKRDVMKASTMLEHEAQYATILAFDVKIEREAQ 970
            |..:.|.:.||||:.:        ||.: .|||.:             :|...:.::...:.|| 
  Fly   325 VMRTWLPAGEALLQMI--------AIHLPSPVVAQ-------------KYRMEMLYEGPHDDEA- 367

  Fly   971 EMADSLGVKIFQAD---IIY-------------HLFDKFTAYREELKQK-----------KREEF 1008
                ::.||....|   ::|             :.|.:..|.:....||           |:|:.
  Fly   368 ----AIAVKSCDPDGPLMMYISKMVPTSDKGRFYAFGRVFAGKVATGQKCRIMGPNYTPGKKEDL 428

  Fly  1009 RSVAVFPCKLRILPQFVFNSRDPIVMGVMVEN----------GIVKVGTPICVPSKEFVDIGIVT 1063
            ...|:              .|..::||..||.          |:|.|       .:..|..|.:|
  Fly   429 YEKAI--------------QRTILMMGRYVEAIEDVPSGNICGLVGV-------DQFLVKTGTIT 472

  Fly  1064 SIESNH--KQIEFARKGQEICVKIDP-IPGESPKMFG--RHFEADDMLISKISRQS 1114
            :.:..|  |.::|: ....:.|.::| .|.:.||:..  :.....|.::..|..:|
  Fly   473 TFKDAHNMKVMKFS-VSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEES 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF5BNP_001246599.1 PRK04004 553..1129 CDD:235195 127/633 (20%)
IF2_eIF5B 557..769 CDD:206674 57/235 (24%)
aeIF5B_II 779..889 CDD:293904 15/109 (14%)
IF-2 890..993 CDD:288813 23/123 (19%)
IF2_aeIF5B_IV 1016..1110 CDD:293911 20/108 (19%)
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 130/641 (20%)
EF2 20..236 CDD:206672 58/249 (23%)
EF2_snRNP_like_II 380..474 CDD:293901 19/114 (17%)
EF2_snRNP_III 489..560 CDD:293918 8/39 (21%)
aeEF2_snRNP_like_IV 560..732 CDD:238839
eEF2_snRNP_like_C 728..807 CDD:239763
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464672
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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