DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF5B and F46B6.6

DIOPT Version :9

Sequence 1:NP_001246599.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster
Sequence 2:NP_001023936.1 Gene:F46B6.6 / 179374 WormBaseID:WBGene00009771 Length:702 Species:Caenorhabditis elegans


Alignment Length:694 Identity:165/694 - (23%)
Similarity:272/694 - (39%) Gaps:200/694 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   490 NEDTDDDEDDDDDEDDSDDSDGDSDDSREVSVL------------ANDPESRRLRAEARILKRQA 542
            :|.|:..|..|....|:..||...||   ||:|            .|.|..:..:.:|. |..|.
 Worm    85 SEITEFLESLDRRNVDAIISDSPLDD---VSILQTTAAFSFKPRFVNGPPKKTEKEDAD-LHPQL 145

  Fly   543 EAEKKRSTDELRAGVVCVLGHVDTGKTKILDKLRRTHVQDSEAGGITQQIGATNVPIEAIKEQTK 607
            ||..|..  |.|..:|.::||||.|||.:||.:|.:.:...|.|||||.|||.:|.:...:..| 
 Worm   146 EASPKDL--ERRPPIVTIMGHVDHGKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVT- 207

  Fly   608 YVKAAAGFEHRLPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIQLLKKKK 672
                            .:|||||.:|:::|.||:...||.:|||....|::.||.:||:..|...
 Worm   208 ----------------FLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKEQTAQSIKFAKDAN 256

  Fly   673 CPFIVALNKIDRLYDWKQLARRDV--RDVLKEQQSNTQLEFQQRTKDVILQFAEQGLNAALFYEN 735
            ...:||:||||:.......|.|.:  .||:.||....                            
 Worm   257 VQLVVAVNKIDKPNADPMRAMRSLLEHDVVVEQLGGD---------------------------- 293

  Fly   736 TDPKTYISLVPTSAISGEGMGNL---LFMIADFCQNMLAKRLMYSEELQATVLEVKALPGLGTTI 797
                  :..|..||:....:.:|   |.:.||.......|:    .:::|.::|...:.|:|...
 Worm   294 ------VQCVEVSALQSRNLPSLQDALLLQADVMDLKATKK----GKVEAVIIESSVVHGIGKVC 348

  Fly   798 DAILINGKLREGQTMVVAGT-----------DGPIVTQIRSLLMPQPMKELRVKNAYVEYKEVKA 851
            ..::..|.|::| .::|||:           :|.|| |:.:     |.:.:||..    :|:...
 Worm   349 TLVVSRGTLKKG-CVLVAGSSWCRVKTMHDENGKIV-QVAT-----PSQPVRVSG----WKDDLP 402

  Fly   852 AQG-VKIAAKDLEKAIAGINL----LIAHKPD---EVEICTEEVARE---------------LKS 893
            ..| :.:.|:.:::|...:||    ::..|.|   |......:.|||               ..|
 Worm   403 TPGDLVLEAETVDRAQKAVNLRIDNMMREKADRDWEDTKDQRDKARETYLSNRQQLLDRGQRFGS 467

  Fly   894 ALSHIKLAQTGVH-------------------VQASTLGSLEALLEFLRT-----SKIPYSAIRI 934
            .|.:|      ||                   ::....|:|||:||.|.|     .|:......:
 Worm   468 TLRNI------VHKKQRIEKDVADGSPKFRLIIRTDVEGTLEAILEILSTYKSEQCKLQLVDFEV 526

  Fly   935 GPVVKRDVMKASTMLEHEAQYATILAFDVKIEREAQEMADSLGVKIFQADIIYHLFDKFTAYREE 999
            ||..::|:..|      :...|||..|:|:...:.::.||:.|::|...::||.:.:   :.:.|
 Worm   527 GPPTEKDIELA------KETDATIYTFNVETSAKLKQRADAAGIQIDSFNVIYRMIE---SLKGE 582

  Fly  1000 LKQK--KREEFRSVAVFPCKLRILPQFVFN----SRDPIVMGVMVENG----------------- 1041
            |..:  |..|...|.    :..:|.:||.:    .|.||. |.:|..|                 
 Worm   583 LSARIPKLTELHLVG----EGHVLKEFVISDRGRKRQPIA-GTLVNWGNFDRHCIYKFTRGNQVV 642

  Fly  1042 ------IVKVGTPICVPSKEFVDIGIVTSIESNHKQIEFARKGQ 1079
                  .:|.|..:...:|...::|:..|    .|.|.|....|
 Worm   643 YEGEVETMKAGMEVVTNAKTNTEVGLALS----DKNIRFKEDDQ 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF5BNP_001246599.1 PRK04004 553..1129 CDD:235195 144/619 (23%)
IF2_eIF5B 557..769 CDD:206674 61/216 (28%)
aeIF5B_II 779..889 CDD:293904 26/128 (20%)
IF-2 890..993 CDD:288813 30/141 (21%)
IF2_aeIF5B_IV 1016..1110 CDD:293911 18/91 (20%)
F46B6.6NP_001023936.1 InfB 39..694 CDD:392272 165/694 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1124591at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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