DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF1A and AT5G35680

DIOPT Version :9

Sequence 1:NP_001287386.1 Gene:eIF1A / 44260 FlyBaseID:FBgn0026250 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001190425.1 Gene:AT5G35680 / 833541 AraportID:AT5G35680 Length:150 Species:Arabidopsis thaliana


Alignment Length:132 Identity:98/132 - (74%)
Similarity:107/132 - (81%) Gaps:2/132 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPKNKGKGGKNRRRGKNENEFEKRELIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKL 65
            ||||||||||||:|||||.:.||||||||||.||||||.:||||||.:.||.||||||||||||:
plant     1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCHIRGKM 65

  Fly    66 RKKVWINQGDIILVGLRDYQDSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDGFDEDI 130
            .|||||..|||||||||||||.||||||||..||||.||.|||.||:.|:||.:  |.|..|:|.
plant    66 HKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGI--VGDLDDDDD 128

  Fly   131 EF 132
            .|
plant   129 VF 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF1ANP_001287386.1 PTZ00329 1..147 CDD:185558 98/132 (74%)
AT5G35680NP_001190425.1 PLN00208 1..119 CDD:177798 93/117 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 108 1.000 Domainoid score I2157
eggNOG 1 0.900 - - E1_COG0361
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I1318
OMA 1 1.010 - - QHG54096
OrthoDB 1 1.010 - - D1426335at2759
OrthoFinder 1 1.000 - - FOG0000631
OrthoInspector 1 1.000 - - otm3106
orthoMCL 1 0.900 - - OOG6_100738
Panther 1 1.100 - - O PTHR21668
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X376
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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