DRSC/TRiP Functional Genomics Resources

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Protein Alignment ps and BTR1L

DIOPT Version :10

Sequence 1:NP_001262415.1 Gene:ps / 44258 FlyBaseID:FBgn0261552 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_850764.1 Gene:BTR1L / 830322 AraportID:AT5G04430 Length:334 Species:Arabidopsis thaliana


Alignment Length:529 Identity:125/529 - (23%)
Similarity:205/529 - (38%) Gaps:210/529 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 ESVCSGIEVEI-----ENNNNNHIHHGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVK 308
            ||..:|...|:     |.::::.....|...|::.||...|:|::|||||.||...|..:|||::
plant     5 ESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQ 69

  Fly   309 MSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILV 373
            :|::.:|:||||:|:.:|:||.:.::..:|.|:||      |.:::...|..:.:.| ::::::|
plant    70 LSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDK------LHSELHAEDGNEVEPR-RRIRLVV 127

  Fly   374 PNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTD---VSLQERCITIIGDKENNKNACKMILSK 435
            |||:.|.|||||||.||...|||.:.::||  |.|   ..|.:|.:|:.|..|....|..:||:|
plant   128 PNSSCGGIIGKGGATIKSFIEESKAGIKIS--PLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAK 190

  Fly   436 IVEDPQSGTCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGGANSAASLLV 500
            :.||......::..|:......:.|:  |.|||....::  :||..||.                
plant   191 LTEDDHYSQNVHSPYSYAGLFYSGFH--GPPYAYALPSV--ATAGYNSV---------------- 235

  Fly   501 NGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEVVAALSVLAKYGVLGMGVG 565
                          |.|||                |||                .||        
plant   236 --------------NYAPN----------------GSG----------------GKY-------- 246

  Fly   566 VSHTNGAHSTLGNFLGVTTLDQQTAAAASAATASNVFGAVGQVNLEQYAAAVASAAAASRPTQSQ 630
                                                                          |:.
plant   247 --------------------------------------------------------------QNH 249

  Fly   631 LDAAAVQFDPFRHLGSATAPAATPVSLNNNSFGLTATTGTATTAQLGGLSKSPTPGDLSSKDSKN 695
            .:.|                                    :||..:|                  
plant   250 KEEA------------------------------------STTVTIG------------------ 260

  Fly   696 VEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQ 760
              |.:..||.:||..||:::||..::||.::||.:|.|..||.:|.|:|||...||.:|:.:|:|
plant   261 --VADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQ 323

  Fly   761 KINEEETKR 769
            |: :..|:|
plant   324 KV-DSATER 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psNP_001262415.1 KH-I_NOVA_rpt1 274..345 CDD:411863 30/70 (43%)
KH-I_NOVA_rpt2 367..436 CDD:411864 29/71 (41%)
KH-I_NOVA_rpt3 694..762 CDD:411807 27/67 (40%)
BTR1LNP_850764.1 KH-I_BTR1_rpt1 34..106 CDD:411941 30/77 (39%)
KH-I_BTR1_rpt2 123..191 CDD:411865 29/69 (42%)
KH-I_BTR1_rpt3 255..325 CDD:411942 30/89 (34%)

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