DRSC/TRiP Functional Genomics Resources

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Protein Alignment ps and AT2G22600

DIOPT Version :10

Sequence 1:NP_001262415.1 Gene:ps / 44258 FlyBaseID:FBgn0261552 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_850026.1 Gene:AT2G22600 / 816791 AraportID:AT2G22600 Length:632 Species:Arabidopsis thaliana


Alignment Length:566 Identity:119/566 - (21%)
Similarity:204/566 - (36%) Gaps:171/566 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 GAIIGKGGETIASLQKDTGARVKMSKSHDFYP----GT-TERVCLITGST----EAIMVVMEFIM 341
            ||::|.||:.:..:::::||.:::      .|    || .:.:..|||..    :|:::|..:|.
plant   152 GAVLGLGGKNVEWMRRNSGAMIRV------LPPPICGTKNDELIQITGDVLAVKKALVMVSSYIQ 210

  Fly   342 ----------------------DKIREKPD-------------------LTNKIVDTDSKQTQER 365
                                  |...|.|.                   .:|:.:..|...:.||
plant   211 NNAPLNGYPPPLSIKGYESLSTDGNSEDPHSEFFPNLRSSSLSNATEIVASNRHLPYDGGNSTER 275

  Fly   366 DKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKEN------ 424
            ....||:..:..||.||||.|..|:.::.|:|:.:.:. .|..|| .||.:| :..:||      
plant   276 KVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVG-APLKVS-GERVVT-VSARENLESRYS 337

  Fly   425 -NKNACKMILSKIVE-DPQSGTCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGT 487
             .:||..::.::.|| |.:.|                ..|     ..:..||..:...:.|....
plant   338 HAQNALALVFARSVEIDVEKG----------------LRP-----GLHNGAIVKTKLLVPSHFAN 381

  Fly   488 TIGGANSAASLLVNGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEVVAALS 552
            :..|..:..:::..|..:::|             |..|:||.|         ||   ||||  :.
plant   382 SFNGNGNREAIIATGADVHIS-------------VGNQVLEWI---------SE---NEVV--IE 419

  Fly   553 VLAKYGVLGMGVGVSHTNGAHSTLGNFLGVTTLDQQTAAAASAATASNVFGAVG---QV-NLEQY 613
            :..:|         ||...|.:.:.:.|....|.:: ......|..||.:.:.|   |: ||:  
plant   420 IKGEY---------SHVQKALTHVSSKLRENLLPKK-VLGEMRARVSNPYESAGGRSQIYNLQ-- 472

  Fly   614 AAAVASAAAASRPTQSQLDAAAVQFDPFRHLGSATAPAATPVSLNN-------------NSFGLT 665
                .|...|||.....:.||.......|       ..|..:..|:             |.|.|.
plant   473 ----PSQQDASRGDSLSVSAAVPDLKMVR-------SGAEVLKSNSVMHTEVLKEVDELNDFTLP 526

  Fly   666 ATTGTATTAQLGGLSKSPTPGDLSS--KDSKNVEVPEV---------IIGAILGPSGRSLVEIQH 719
            .:.......|.....:..:.||:||  ..||.|.|.::         .:|::.|..|..:..:|.
plant   527 QSLLEEDLTQGMKQLQMSSNGDVSSLPPRSKGVSVRKITLELAVEKDALGSLYGRDGTGVDNLQQ 591

  Fly   720 VSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKINEE 765
            :|||||.:..     |......|.|:|.|.....|..|||..:.::
plant   592 ISGANVDVKD-----PTGTEATVLISGNPEQARTAMSLIESILTDQ 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psNP_001262415.1 KH-I_NOVA_rpt1 274..345 CDD:411863 17/89 (19%)
KH-I_NOVA_rpt2 367..436 CDD:411864 22/75 (29%)
KH-I_NOVA_rpt3 694..762 CDD:411807 21/76 (28%)
AT2G22600NP_850026.1 KH-I 24..>77 CDD:469614
KH-I 148..210 CDD:469614 15/63 (24%)
KH-I 276..343 CDD:469614 21/69 (30%)
KH-I 371..439 CDD:469614 19/103 (18%)
KH-I_HEN4_like_rpt5 566..629 CDD:411890 18/67 (27%)
Blue background indicates that the domain is not in the aligned region.

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