Protein Alignment ps and Fubp1

DIOPT Version :9

• Sequence 1: NP_001262415.1
• Gene: ps / 44258
• FlyBaseID: FBgn0261552
• Length: 780
• Species: Drosophila melanogaster
• Sequence 2: XP_038959028.1
• Gene: Fubp1 / 654496
• RGDID: 1591892
• Length: 697
• Species: Rattus norvegicus
• Alignment Length: 615
• Identity: 137/615 - (22%)
• Similarity: 217/615 - (35%)
• Gaps: 179/615 - (29%)

  Fly   169 PLSENGSPNGTPGAQTPTATASGNTAAALASAAAAAAAATSGGNGSSITNCNSNNSSSSSNAQQQ 233
            |...:||..|..|...       |.|...|...|...||..||:..  |:.|||:.....   |:
  Rat     8 PPPSSGSAGGGGGGGV-------NDAFKDALQRARQIAAKIGGDAG--TSLNSNDYGYGG---QK 60

  Fly   234 LQL----GNYKTNSCWCYGESVCSGI-------EVEIENNNNN------HIHHGETTYHMKILVP 281
            ..|    |::...|...:.|.:.|..       :|..:|::..      |.....:....:..||
  Rat    61 RPLEDGDGSWTNPSSTTHWEGMPSPFKDQPDAKKVPPQNDSFGAQLPPMHQQQSRSVMTEEYKVP 125

  Fly   282 AVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV---VMEFIMDK 343
            ....|.|||:|||.|:.:|:::|.:::::....   |..||.|::||:.|::..   :::.|::|
  Rat   126 DGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG---GLPERSCMLTGTPESVQSAKRLLDQIVEK 187

  Fly   344 IREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESG-SYVQISQKPT 407
            .|..|...:.  |......||      |::|.|.||::|||||..|||::|.:| ..|.|...|.
  Rat   188 GRPAPGFHHG--DGPGNAVQE------IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQ 244

  Fly   408 DVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPYATNQN 472
            :.. .::.:.|.||....:.|.:|:| :::.| |.|                |....:.|
  Rat   245 NTG-ADKPLRITGDPYKVQQAKEMVL-ELIRD-QGG----------------FREVRNEY----- 285

  Fly   473 AINSSTASLNSTLGTTIGGANSAASLLVNGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMRGS 537
                         |:.|||                  |.|...|.|..||..       |..|..
  Rat   286 -------------GSRIGG------------------NEGIDVPIPRFAVGI-------VIGRNG 312

  Fly   538 GYSETVTNEVVAALSVLAKYGVLGMGVGVSHTNGAHSTLGNFLGVTTLDQQTAAAASAATASNVF 602
            ...:.:.|:.             |:.:.....:|           ||.|:
  Rat   313 EMIKKIQNDA-------------GVRIQFKPDDG-----------TTPDR--------------- 338

  Fly   603 GAVGQVNLEQYAAAVASAAAASRPTQSQLDAAAVQFDPFRHLGSATAPAATPVSLNNNSFGLTAT 667
              :.|:              ...|.:.| .||.:..|..|     :..|..|        |....
  Rat   339 --IAQI--------------TGPPDRCQ-HAAEIITDLLR-----SVQAGNP--------GGPGP 373

  Fly   668 TGTATTAQLGGLSKSPTPGDLSSKDSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGI 732
            .|.......|..:..| ||.|   ...|..||....|.|:|..|.::..|...|||.:::.:...
  Rat   374 GGRGRGRGQGNWNMGP-PGGL---QEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 434

  Fly   733 FAPGTRNRIVTITGQPSAIAKAQYLIEQKI 762
            .......::.||.|.|..|..|:.|||:||
  Rat   435 PNADPNMKLFTIRGTPQQIDYARQLIEEKI 464

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ps	NP_001262415.1	PCBP_like_KH	275..340	CDD:239089	19/67 (28%)
		PCBP_like_KH	368..433	CDD:239089	23/65 (35%)
		KH-I	696..759	CDD:238053	17/62 (27%)
Fubp1	XP_038959028.1	KH-I_FUBP1_rpt1	115..189	CDD:411906	21/76 (28%)
		KH-I_FUBP1_rpt2	203..272	CDD:411909	26/76 (34%)
		KH-I_FUBP1_rpt3	293..360	CDD:411912	19/129 (15%)
		KH-I_FUBP1_rpt4	393..464	CDD:411915	21/73 (29%)
		DUF1897	628..>642	CDD:401086

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166335324
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.840