Protein Alignment ps and nova2

DIOPT Version :10

• Sequence 1: NP_001262415.1
• Gene: ps / 44258
• FlyBaseID: FBgn0261552
• Length: 780
• Species: Drosophila melanogaster
• Sequence 2: NP_001025686.1
• Gene: nova2 / 595078
• XenbaseID: XB-GENE-489037
• Length: 413
• Species: Xenopus tropicalis
• Alignment Length: 510
• Identity: 184/510 - (36%)
• Similarity: 245/510 - (48%)
• Gaps: 154/510 - (30%)

  Fly   276 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFI 340
            :|:|:|:.|:|:||||||:||..||::|||.:|:|||.||||||||||||:.||.|:::.|..||
 Frog    36 LKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAESLLSVHNFI 100

  Fly   341 MDKIREKPDLTNK-----IVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYV 400
            .:|:||.|....|     ::...:....||.||.|::|||:|||:|||||||.::.|.||||::|
 Frog   101 AEKVREVPQGGTKNDLGVLLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWV 165

  Fly   401 QISQKPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTC-LNVSYADVSGPVANFNPTG 464
            |:||||...:|.||.:|:.|:....:.|.:.|:.|..|||..||. ||:||.:..|||||.||||
 Frog   166 QLSQKPAGPNLHERVVTVSGEPSQVQKAIRSIIHKSREDPPQGTTHLNISYTNSQGPVANSNPTG 230

  Fly   465 SPYATNQNAINSSTASLNSTLGTTIGGANSAASLLVNGTGINLSINLGSP----NPAPNLAVATQ 525
            ||||                     ||  ||..:|             :|    .|||.......
 Frog   231 SPYA---------------------GG--SAEQVL-------------TPFQPAPPAPPAITGGD 259

  Fly   526 LLEHIKVAMRGSGYSETVTNEVVAALSVLAKYGV-LGMG----VGVSHTNGAHSTLGNFLGVTTL 585
            ||                  .:.|||:.||.||. .|||    ||     |.|....|.|...|
 Frog   260 LL------------------AISAALNTLASYGYSTGMGFNPLVG-----GVHPAAVNLLASYT- 300

  Fly   586 DQQTAAAASAATASNVFGAVGQVNLEQYAAAVASAAAASRPTQSQLDAAAVQFDPFRHLGSATAP 650
                   ..|..|..:.|  |.:.||:
 Frog   301 -------GEAGPALGLGG--GGILLEK-------------------------------------- 318

  Fly   651 AATPVSLNNNSFGLTATTGTATTAQLGGLSKSPTPGDLSSKDSKNVEVPEVIIGAILGPSGRSLV 715
                       .|..:.||                     |::..:.|||.::|||||..|::||
 Frog   319 -----------MGAESVTG---------------------KETLEMAVPETLVGAILGKGGKTLV 351

  Fly   716 EIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKINEEETKRA 770
            |.|.::||.:||||||.|.||||:|.|||||.|.|...|||||.|::..|:..|:
 Frog   352 EYQELTGARIQISKKGEFVPGTRSRKVTITGPPGATQAAQYLIGQRVAYEQGVRS 406

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ps	NP_001262415.1	KH-I_NOVA_rpt1	274..345	CDD:411863	41/68 (60%)
		KH-I_NOVA_rpt2	367..436	CDD:411864	34/68 (50%)
		KH-I_NOVA_rpt3	694..762	CDD:411807	40/67 (60%)
nova2	NP_001025686.1	KH-I_NOVA_rpt1	34..105	CDD:411863	41/68 (60%)
		KH-I_NOVA_rpt2	132..200	CDD:411864	34/67 (51%)
		KH-I_NOVA_rpt3	328..398	CDD:411807	40/69 (58%)