Protein Alignment ps and nova1

DIOPT Version :10

• Sequence 1: NP_001262415.1
• Gene: ps / 44258
• FlyBaseID: FBgn0261552
• Length: 780
• Species: Drosophila melanogaster
• Sequence 2: NP_001038254.1
• Gene: nova1 / 555590
• ZFINID: ZDB-GENE-060526-113
• Length: 495
• Species: Danio rerio
• Alignment Length: 533
• Identity: 216/533 - (40%)
• Similarity: 297/533 - (55%)
• Gaps: 98/533 - (18%)

  Fly   255 IEVEIENNNNNHIHHGET-TYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPG 318
            :|...|.::....:.||. .|.:|:|:|:.|:|:||||||:||..|||:|||.:|:|||.|||||
Zfish    37 LETPTEASSTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 101

  Fly   319 TTERVCLITGSTEAIMVVMEFIMDKIREKPDLTNK-----IVDTDSKQTQERDKQVKILVPNSTA 378
            ||||||||.|:.||:..|..||.:|:||.|..:.|     |:...:....:|.||.|::||||||
Zfish   102 TTERVCLIQGTVEALNGVHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQAKLIVPNSTA 166

  Fly   379 GMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 443
            |:|||||||.:|.:.|:||::||:||||..::||||.:|:.|:.|.|:.|.::|:.||.|||||.
Zfish   167 GLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQNRKAVEIIVQKIQEDPQSS 231

  Fly   444 TCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGGANSAASLLVNGTGINLS 508
            :|||:||::::|||||.||||||:|.:...:.::.|:  :|..|.:|.|..|      |.|
Zfish   232 SCLNISYSNITGPVANSNPTGSPFANSTEVLPNAAAA--ATASTLLGQAGLA------GMG---- 284

  Fly   509 INLGSPNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEVVAALSVLAKYGVLGMGVGVSHTNGAH 573
               |.|....:|: ...||                  .:.:||:.||.||.        :||
Zfish   285 ---GFPAAMSSLS-GNDLL------------------AITSALNTLASYGY--------NTN--- 316

  Fly   574 STLGNFLGVTTLDQQTAAAASAATASNVFGAVGQVNLEQYAAAVASAAAASRPTQSQLDAAAVQF 638
             |||  ||:           :.|.||.|..||.       |:|..:||||:....:....|:
Zfish   317 -TLG--LGL-----------NPAAASGVLAAVA-------ASANPAAAAAANLLATYASEAS--- 357

  Fly   639 DPFRHLGSATAPAATPVSLNNNSFG-LTATTGTA----------TTAQLGGLSKSPTPGDLSSKD 692
                  |....|||.  ||...|.| |.|.||.:          ..:.|.|..|....|    |:
Zfish   358 ------GGGGHPAAP--SLGGFSLGSLAAATGASNGYLNPSSPLVASSLLGTEKLAEGG----KE 410

  Fly   693 SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYL 757
            ...:.|||.::|||||..|::|||.|.::||.:||||||.|.||||||.|||||.|:|...||||
Zfish   411 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYL 475

  Fly   758 IEQKINEEETKRA 770
            |.|:|..|:..||
Zfish   476 ISQRITYEQGVRA 488

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ps	NP_001262415.1	KH-I_NOVA_rpt1	274..345	CDD:411863	44/70 (63%)
		KH-I_NOVA_rpt2	367..436	CDD:411864	37/68 (54%)
		KH-I_NOVA_rpt3	694..762	CDD:411807	41/67 (61%)
nova1	NP_001038254.1	KH-I_NOVA_rpt1	57..128	CDD:411863	44/70 (63%)
		KH-I_NOVA_rpt2	155..224	CDD:411864	37/68 (54%)
		KH-I_NOVA_rpt3	410..480	CDD:411807	41/69 (59%)