Protein Alignment ps and pcbp3

DIOPT Version :10

• Sequence 1: NP_001262415.1
• Gene: ps / 44258
• FlyBaseID: FBgn0261552
• Length: 780
• Species: Drosophila melanogaster
• Sequence 2: XP_021334345.1
• Gene: pcbp3 / 553765
• ZFINID: ZDB-GENE-050522-157
• Length: 358
• Species: Danio rerio
• Alignment Length: 495
• Identity: 116/495 - (23%)
• Similarity: 182/495 - (36%)
• Gaps: 168/495 - (33%)

  Fly   273 TYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVM 337
            |..:::|:.....|:||||.|||:..:::::|||:.:|:.:     ..||:..|||.|:||....
Zfish    15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFKAF 74

  Fly   338 EFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI 402
            ..|..|..|  |:.|.:  ::|..|.:....::::||.|..|.:|||||:.||:::|.:|:.||:
Zfish    75 AMIAYKFEE--DIINSM--SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135

  Fly   403 S--QKPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGS 465
            :  ..|...   ||.:||.|..|......|.|...::|.|..|..:
Zfish   136 AGDMLPNST---ERAVTISGTPEAIIQCVKQICVVMLESPPKGATI------------------- 178

  Fly   466 PYATNQNAINSSTASLNSTLGTTIGGANSAASLLVNGTGINLSINLGSPNPAPNLAVATQLLEHI 530
            ||....    :||..:.|      ||...|..|..:...::|                  ||:|
Zfish   179 PYRPKP----ASTPVIFS------GGQVRADPLAASAANLSL------------------LLQH- 214

  Fly   531 KVAMRGSGYSETVTNEVVAALSVLAKYGVLGMGVGVSHTNGAHSTLGNFLGVTTLDQQTAAAASA 595
                                 ..|..|.:.|
Zfish   215 ---------------------QPLPAYTIQG---------------------------------- 224

  Fly   596 ATASNVFGAVGQVNLEQYAAAVASAAAASRPTQ-SQLDAAAVQFDPFRHLGSATAPAATPVSLNN 659
                            |||.........|.|.| ::|...|:|..||..||.
Zfish   225 ----------------QYAIPHPDLYCPSNPQQLTKLHQLAMQQTPFTPLGQ------------- 260

  Fly   660 NSFGLTATTGTATTAQLGGLSKSPTPGDLSSKDSKNVEVPEVIIGAILGPSGRSLVEIQHVSGAN 724
                        ||....||..||      ...:..:.:|..:||.|:|..|..:.||:.:|||.
Zfish   261 ------------TTPAFPGLDASP------PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQ 307

  Fly   725 VQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKINE 764
            ::|:..   ..|:..|.:||||.|:.|:.|||||..:..:
Zfish   308 IKIANA---MEGSSERQITITGTPANISLAQYLINARFRD 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ps	NP_001262415.1	KH-I_NOVA_rpt1	274..345	CDD:411863	23/70 (33%)
		KH-I_NOVA_rpt2	367..436	CDD:411864	24/70 (34%)
		KH-I_NOVA_rpt3	694..762	CDD:411807	25/67 (37%)
pcbp3	XP_021334345.1	KH-I_PCBP3_rpt1	8..84	CDD:411944	25/75 (33%)
		KH-I_PCBP3_rpt2	95..173	CDD:411947	26/80 (33%)
		KH-I_PCBP3_rpt3	267..341	CDD:411950	29/82 (35%)