DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ps and fubp1

DIOPT Version :9

Sequence 1:	NP_001262415.1	Gene:	ps / 44258	FlyBaseID:	FBgn0261552	Length:	780	Species:	Drosophila melanogaster
Sequence 2:	XP_009295789.1	Gene:	fubp1 / 406418	ZFINID:	ZDB-GENE-040426-2159	Length:	662	Species:	Danio rerio

Alignment Length:	487	Identity:	102/487 - (20%)
Similarity:	169/487 - (34%)	Gaps:	141/487 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   280 VPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV---VMEFIM 341
            ||....|.|||:|||.|:.||:::|.:::::....   |..:|...:|||.:|||.   ::..|:
Zfish    96 VPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSG---GMPDRSVTLTGSPDAIMTAKRLLSEIV 157

  Fly   342 DKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESG-SYVQISQK 405
            :|.|..|...:.  |.......|      :::|.|.||::|||||..|||::|.:| ..|.|...
Zfish   158 EKGRPSPAFHHN--DGPGMSVHE------MMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDG 214

  Fly   406 PTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPYATN 470
            |.:.. .::.:.|.||....:.|..|::..|.:.                   .|......|
Zfish   215 PQNTG-ADKPLRISGDPFKVQQAKDMVMDLIRDQ-------------------GFREQRGEY--- 256

  Fly   471 QNAINSSTASLNSTLGTTIGGANSAASLLVNGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMR 535
                           |:..||.        .|.|.:|.:      |.|..||..       |..|
Zfish   257 ---------------GSRAGGG--------GGGGESLDV------PVPRFAVGI-------VIGR 285

  Fly   536 GSGYSETVTNEVVAALSVLAKYGVLGMGVGVSHTNGAHSTLGNFLGVTTLDQQTAAAASAATASN 600
            .....:.:.|:.             |:.:.....:|                        :|...
Zfish   286 SGEMIKKIQNDT-------------GVRIQFKPDDG------------------------STPER 313

  Fly   601 VFGAVGQVNLEQYAAAVASAAAASRPTQSQLDAAAVQFDPFRHLGSATAPAATPVSLNNNSFGLT 665
            :...:|..:..|:||.:.:                   |..|.:.:...|       .:...|..
Zfish   314 IAQIMGPPDRAQHAADIIT-------------------DLLRSVQAGGPP-------GHGGGGGG 352

  Fly   666 ATTGTATTAQLGGLSKSPTPGDLSSKDSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKK 730
            ...|.......|..:..| ||.|   ......||.:..|.|:|..|.::..|...|||.:::.:.
Zfish   353 GGGGRGRGRGQGNWNMGP-PGGL---QEFTFTVPTMKTGLIIGKGGETIKNISQQSGARIELQRN 413

  Fly   731 GIFAPGTRNRIVTITGQPSAIAKAQYLIEQKI 762
            .........:|.|:.|.|..|..|:.|:|:||
Zfish   414 PPPNSDPNIKIFTVRGSPQQIDYARQLVEEKI 445

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ps	NP_001262415.1	PCBP_like_KH	275..340	CDD:239089	21/62 (34%)
		PCBP_like_KH	368..433	CDD:239089	22/65 (34%)
		KH-I	696..759	CDD:238053	17/62 (27%)
fubp1	XP_009295789.1	KH-I	91..153	CDD:238053	21/59 (36%)
		KH-I	176..241	CDD:238053	23/71 (32%)
		KH-I	269..331	CDD:238053	15/111 (14%)
		KH	378..445	CDD:197652	18/66 (27%)
		DUF1897	625..>640	CDD:286140
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170574631
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.840