Sequence 1: | NP_001262415.1 | Gene: | ps / 44258 | FlyBaseID: | FBgn0261552 | Length: | 780 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178812.1 | Gene: | Pcbp4 / 363133 | RGDID: | 1307910 | Length: | 403 | Species: | Rattus norvegicus |
Alignment Length: | 521 | Identity: | 111/521 - (21%) |
---|---|---|---|
Similarity: | 175/521 - (33%) | Gaps: | 236/521 - (45%) |
- Green bases have known domain annotations that are detailed below.
Fly 253 SGIEVEIENNNNNHIHHGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYP 317
Fly 318 GTTERVCLITGSTEAIMVVMEFIMDKIRE-------------KPDLTNKIVDTDSKQTQERDKQV 369
Fly 370 KILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK--PTDVSLQERCITIIGDKENNKNACKMI 432
Fly 433 LSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGGANSAAS 497
Fly 498 LLVNGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEVVAALSVLAKYGVLGM 562
Fly 563 GVGVSHTNGAHSTLGNFLGVTTLDQQTAAAASAATASNVFGAVGQVNLEQYAAAVASAAAASRPT 627
Fly 628 QSQLDAAAVQFDPFRHLGSATAPAATPVSLNNNSFGLTATTGTATTAQLGGLSKSPTPGDLSSKD 692
Fly 693 SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYL 757
Fly 758 I 758 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ps | NP_001262415.1 | PCBP_like_KH | 275..340 | CDD:239089 | 20/64 (31%) |
PCBP_like_KH | 368..433 | CDD:239089 | 19/66 (29%) | ||
KH-I | 696..759 | CDD:238053 | 28/63 (44%) | ||
Pcbp4 | NP_001178812.1 | KH-I_PCBP4_rpt1 | 17..86 | CDD:411945 | 23/73 (32%) |
KH-I_PCBP4_rpt2 | 101..172 | CDD:411948 | 22/90 (24%) | ||
KH-I_PCBP4_rpt3 | 241..308 | CDD:411951 | 30/89 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335318 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |