Protein Alignment ps and Fubp3

DIOPT Version :10

• Sequence 1: NP_001262415.1
• Gene: ps / 44258
• FlyBaseID: FBgn0261552
• Length: 780
• Species: Drosophila melanogaster
• Sequence 2: NP_001028561.2
• Gene: Fubp3 / 320267
• MGIID: 2443699
• Length: 575
• Species: Mus musculus
• Alignment Length: 493
• Identity: 103/493 - (20%)
• Similarity: 168/493 - (34%)
• Gaps: 161/493 - (32%)

  Fly   280 VPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEF---IM 341
            ||....|.|||:|||.|:.:|.::|.:::::....   |..||.|::||:.|:|......   |:
Mouse    84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESS---GIPERPCVLTGTPESIEQAKRLLGQIV 145

  Fly   342 DKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESG-SYVQISQK 405
            |:.|..|...|   |.|...|.:     ::|:|.|..|::|||||..|||::|.:| ..|.|...
Mouse   146 DRCRNGPGFHN---DMDGNSTIQ-----ELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDG 202

  Fly   406 PTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPYATN 470
            |.... .::.:.|.||....:.|.:|:|..|.|..|                |:|....|.:.:.
Mouse   203 PLPTG-ADKPLRITGDPFKVQQAREMVLEIIREKDQ----------------ADFRGVRSDFTSR 250

  Fly   471 QNAINSSTASLNSTLGTTIGGANSAASLLVNGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMR 535
            ....:...:.....:|..||........:.|..|:.:..   .|:.
Mouse   251 AGGGSIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQF---KPDD------------------- 293

  Fly   536 GSGYSETVTNEVVAALSVLAKYGVLGMGVGVSHTNGAHSTLGNFLGVTTLDQQTAAAASAATASN 600
                                         |:|....|.
Mouse   294 -----------------------------GISPERAAQ--------------------------- 302

  Fly   601 VFGAVGQVNLEQYAAAVASAAAASRPTQSQLDAAAVQFDPFRHLGSATAPAATPVSLNNNSFGLT 665
               .:|..:..|:||.:.:....:...:..|.                              |||
Mouse   303 ---VMGPPDRCQHAARIINELILTAQEREILG------------------------------GLT 334

  Fly   666 ATTGTATTAQLGGLSKSP----TPGDLSSKDSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQ 726
            .|.|.       |..:|.    |||.:   ......||....|.::|..|.::..|...|||:|:
Mouse   335 VTRGR-------GRGRSDWSVGTPGGV---QEITYTVPADKCGLVIGKGGENIKSINQQSGAHVE 389

  Fly   727 ISKKGIFAPGT--RNRIVTITGQPSAIAKAQYLIEQKI 762
            :.:..  .|.|  ..||.||.|.|..:..|::||::|:
Mouse   390 LQRNP--PPNTDPNLRIFTIRGAPQQMEVARHLIDEKV 425

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ps	NP_001262415.1	KH-I_NOVA_rpt1	274..345	CDD:411863	22/67 (33%)
		KH-I_NOVA_rpt2	367..436	CDD:411864	23/69 (33%)
		KH-I_NOVA_rpt3	694..762	CDD:411807	21/69 (30%)
Fubp3	NP_001028561.2	KH-I_FUBP3_rpt1	78..148	CDD:411908	22/66 (33%)
		KH-I_FUBP3_rpt2	159..241	CDD:411911	29/103 (28%)
		KH-I_FUBP3_rpt3	252..321	CDD:411914	13/149 (9%)
		KH-I_FUBP3_rpt4	356..424	CDD:411917	21/69 (30%)