DRSC/TRiP Functional Genomics Resources

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Protein Alignment ps and Igf2bp2

DIOPT Version :10

Sequence 1:NP_001262415.1 Gene:ps / 44258 FlyBaseID:FBgn0261552 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_001257527.1 Gene:Igf2bp2 / 303824 RGDID:1305614 Length:592 Species:Rattus norvegicus


Alignment Length:646 Identity:134/646 - (20%)
Similarity:206/646 - (31%) Gaps:246/646 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 YSLAVHSYQKQIESPANPSHVPHHQMDLSPLSENGSPNGTPGAQTPTATASGNTAAALASAAAAA 204
            ||::.....::|:....|.|:....:| ..|:|.|:........|.|.||..|........|..|
  Rat    73 YSVSKKLRSRKIQIRNIPPHLQWEVLD-GLLAEYGTVENVEQVNTDTETAVVNVTYMTREEAKVA 136

  Fly   205 AAATSGGN----GSSITNCNSNNSSSSSNAQQQLQLGNYKTNSCWCYGESVCSGIEVEIENNNNN 265
            ....||..    ...|:.......||.|...:..:.|                            
  Rat   137 IEKLSGHQFEDYSFKISYIPDEELSSPSPPHRAREQG---------------------------- 173

  Fly   266 HIHHG--------ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER 322
               ||        :..:.::||||....||||||.|.||.::.|.|.:||.:.:..:  .|..|:
  Rat   174 ---HGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEK 233

  Fly   323 VCLI----TGSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIG 383
            ...|    .|::||..:::| ||.|..::..|..::             .:|||..|...|.:||
  Rat   234 PVTIHATPEGTSEACRMILE-IMQKEADETKLAEEV-------------PLKILAHNGFVGRLIG 284

  Fly   384 KGGAFIKQIKEESGSYVQISQKPTDVSL--QERCITIIGDKENNKNACKMILSKIVEDPQSGTCL 446
            |.|..:|:|:.|:|:.:.||.. .|:|:  .||.||:.|..|...:|...|:.|:.|..::    
  Rat   285 KEGRNLKKIEHETGTKITISSL-QDLSIYNPERTITVKGTIEACASAEMEIMKKLREAFEN---- 344

  Fly   447 NVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGGANSAASLLVNGTGINLSINL 511
                              ...|.||.|             ..|.|.|.:| |.:..||:::    
  Rat   345 ------------------DMLAVNQQA-------------NLIPGLNLSA-LGIFSTGLSV---- 373

  Fly   512 GSPNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEVVAALSVLAKYGVLGMGVGVSHTNGAHSTL 576
             .|.||               ..||:..|...                        |....||  
  Rat   374 -LPPPA---------------GPRGAPPSPPY------------------------HPFATHS-- 396

  Fly   577 GNFLGVTTLDQQTAAAASAATASNVFGAVGQVNLEQYAAAVASAAAASRPTQSQLDAAAVQFDPF 641
            |.|                   |:::                                     |.
  Rat   397 GYF-------------------SSLY-------------------------------------PH 405

  Fly   642 RHLGSATAPAATPVSLNNNSFGLTATTGTATTAQLGGLSKSPTPGDLSSKDSKNVE--VPEVIIG 704
            .|.|                                     |.|...|..:.:.|.  :|...:|
  Rat   406 HHFG-------------------------------------PFPHHHSYPEQETVSLFIPTQAVG 433

  Fly   705 AILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKINEE 765
            ||:|..|..:.::...:||:::|:...  .|....|:|.|||.|.|..|||..|..|:.||
  Rat   434 AIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFKAQGRIFGKLKEE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psNP_001262415.1 KH-I_NOVA_rpt1 274..345 CDD:411863 27/74 (36%)
KH-I_NOVA_rpt2 367..436 CDD:411864 25/70 (36%)
KH-I_NOVA_rpt3 694..762 CDD:411807 22/69 (32%)
Igf2bp2NP_001257527.1 RRM1_IGF2BP2 2..78 CDD:241070 2/4 (50%)
RRM2_IGF2BP2 82..157 CDD:410038 17/75 (23%)
KH-I_IGF2BP2_rpt1 188..261 CDD:411919 27/75 (36%)
KH-I 265..360 CDD:469614 33/143 (23%)
KH-I_IGF2BP2_rpt3 419..495 CDD:411925 25/76 (33%)
KH-I_IGF2BP2_rpt4 502..578 CDD:411928
Blue background indicates that the domain is not in the aligned region.

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