Protein Alignment ps and Pcbp3

DIOPT Version :10

• Sequence 1: NP_001262415.1
• Gene: ps / 44258
• FlyBaseID: FBgn0261552
• Length: 780
• Species: Drosophila melanogaster
• Sequence 2: XP_006256345.1
• Gene: Pcbp3 / 294336
• RGDID: 1307430
• Length: 394
• Species: Rattus norvegicus
• Alignment Length: 527
• Identity: 125/527 - (23%)
• Similarity: 194/527 - (36%)
• Gaps: 187/527 - (35%)

  Fly   268 HHGE-----------------TTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDF 315
            ||.|                 .|..:::|:.....|:||||.|||:..:::::|||:.:|:.:
  Rat    23 HHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-- 85

  Fly   316 YPGTTERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGM 380
               ..||:..|||.|:||......|..|..|  |:.|.:  ::|..|.:....::::||.|..|.
  Rat    86 ---CPERIVTITGPTDAIFKAFAMIAYKFEE--DIINSM--SNSPATSKPPVTLRLVVPASQCGS 143

  Fly   381 IIGKGGAFIKQIKEESGSYVQIS--QKPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 443
            :|||||:.||:|:|.:|:.||::  ..|...   ||.:||.|..:......|.|...::|.|..|
  Rat   144 LIGKGGSKIKEIRESTGAQVQVAGDMLPNST---ERAVTISGTPDAIIQCVKQICVVMLESPPKG 205

  Fly   444 TCLNVSYADVSGPVANFNPTGSPYATNQ---NAINSSTASLNSTLGTTIGGANSAASLLVNGTGI 505
            ..:.......|.||.        :|..|   :.:.:|||
  Rat   206 ATIPYRPKPASTPVI--------FAGGQVRADPLAASTA-------------------------- 236

  Fly   506 NLSINLGSPNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEVVAALSVLAKYGVLGMGVGVSHTN 570
            |||:                ||:|                      ..|..|.:.|
  Rat   237 NLSL----------------LLQH----------------------PPLPAYTIQG--------- 254

  Fly   571 GAHSTLGNFLGVTTLDQQTAAAASAATASNVFGAVGQVNLEQYAAAVASAAAASRPTQ-SQLDAA 634
                                                     ||        |...|.| ::|...
  Rat   255 -----------------------------------------QY--------AIPHPDQLTKLHQL 270

  Fly   635 AVQFDPFRHLGSATAPA----ATPVSLNNNSFGLTATTGTATTAQLGGLSKSPTPGDLSSKDSKN 695
            |:|..||..||. |.||    ..|:..:..:..|        ..|..||..||      ...:..
  Rat   271 AMQQTPFPPLGQ-TNPAFPGEKLPLHSSEEAQNL--------MGQSSGLDASP------PASTHE 320

  Fly   696 VEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQ 760
            :.:|..:||.|:|..|..:.||:.:|||.::|:..   ..|:..|.:||||.|:.|:.|||||..
  Rat   321 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA---TEGSSERQITITGTPANISLAQYLINA 382

  Fly   761 KINEEET 767
            ::..|.|
  Rat   383 RLTSEVT 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ps	NP_001262415.1	KH-I_NOVA_rpt1	274..345	CDD:411863	23/70 (33%)
		KH-I_NOVA_rpt2	367..436	CDD:411864	24/70 (34%)
		KH-I_NOVA_rpt3	694..762	CDD:411807	25/67 (37%)
Pcbp3	XP_006256345.1	KH-I_PCBP3_rpt1	38..114	CDD:411944	25/82 (30%)
		KH-I_PCBP3_rpt2	125..203	CDD:411947	26/80 (33%)
		KH-I_PCBP3_rpt3	309..383	CDD:411950	29/82 (35%)